Gene Spro_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2878 
Symbol 
ID5603279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3157974 
End bp3158501 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content57% 
IMG OID640938419 
Productfimbrial protein 
Protein accessionYP_001479107 
Protein GI157371118 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.905487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATGG TAGCTTTAAA GACTGCTCGG GCGCTACTGA CGCTAATGCT TTGCAGTGGT 
GCTGTCTGGG CCGACGATGC CAGTGTCAAT ATTACCGGAC GCGTGCTGTC GGCAGCTTGT
GAGCCGACGG TTGACCCGCT GGCAGTGGAC TTGGGCACCC TGTCGCGCAG CATATTAAGC
AGCAAGGGCG TGACAGGTTC CCATACAGAC TTCACATTGC GCCTAAAGAG CTGCCCGGCA
GAGGTCAGCC AGGTACAGGT TCAGTTTGAT GGCGTCGCCG CAACCGGAGA TAACAGTGCA
TTAGCCCTGA CCGGCAGCAG CGTGGCTAAA GGGGTCGGTG TGCAACTGCT GGACAATGCG
AAAAAAGTGT TGGCACCGGG GACGCGCTCA CCATTGATGT CAATCATCGG GGGTAATAGC
ACCGTGAATT CTCTGGCCTT CAGCGCACGC TACATCGCCA CCAGCGACAC TGTGACCGCT
GGCAGTGCCA ATGCCAGCGC CACCTTTACC ATTTGGTACA ACAATTGA
 
Protein sequence
MHMVALKTAR ALLTLMLCSG AVWADDASVN ITGRVLSAAC EPTVDPLAVD LGTLSRSILS 
SKGVTGSHTD FTLRLKSCPA EVSQVQVQFD GVAATGDNSA LALTGSSVAK GVGVQLLDNA
KKVLAPGTRS PLMSIIGGNS TVNSLAFSAR YIATSDTVTA GSANASATFT IWYNN