Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2878 |
Symbol | |
ID | 5603279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3157974 |
End bp | 3158501 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640938419 |
Product | fimbrial protein |
Protein accession | YP_001479107 |
Protein GI | 157371118 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.905487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACATGG TAGCTTTAAA GACTGCTCGG GCGCTACTGA CGCTAATGCT TTGCAGTGGT GCTGTCTGGG CCGACGATGC CAGTGTCAAT ATTACCGGAC GCGTGCTGTC GGCAGCTTGT GAGCCGACGG TTGACCCGCT GGCAGTGGAC TTGGGCACCC TGTCGCGCAG CATATTAAGC AGCAAGGGCG TGACAGGTTC CCATACAGAC TTCACATTGC GCCTAAAGAG CTGCCCGGCA GAGGTCAGCC AGGTACAGGT TCAGTTTGAT GGCGTCGCCG CAACCGGAGA TAACAGTGCA TTAGCCCTGA CCGGCAGCAG CGTGGCTAAA GGGGTCGGTG TGCAACTGCT GGACAATGCG AAAAAAGTGT TGGCACCGGG GACGCGCTCA CCATTGATGT CAATCATCGG GGGTAATAGC ACCGTGAATT CTCTGGCCTT CAGCGCACGC TACATCGCCA CCAGCGACAC TGTGACCGCT GGCAGTGCCA ATGCCAGCGC CACCTTTACC ATTTGGTACA ACAATTGA
|
Protein sequence | MHMVALKTAR ALLTLMLCSG AVWADDASVN ITGRVLSAAC EPTVDPLAVD LGTLSRSILS SKGVTGSHTD FTLRLKSCPA EVSQVQVQFD GVAATGDNSA LALTGSSVAK GVGVQLLDNA KKVLAPGTRS PLMSIIGGNS TVNSLAFSAR YIATSDTVTA GSANASATFT IWYNN
|
| |