Gene Spro_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2875 
Symbol 
ID5603273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3155715 
End bp3156782 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content50% 
IMG OID640938416 
Productfimbrial protein 
Protein accessionYP_001479104 
Protein GI157371115 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC CAATAAAAAA AAGAAGGCTG ACAATCGCAA CAACATATTG CCTAAAGACG 
CGATGCCTGG TGGCTGGCGT CGCGCTGATG GGGTTGTATA GCCAGCAGGG ACTGGCGTTT
GACTGTCGCC CCAGAACTGC CTCCATTACT TTAGATCTGG GAAACATTGA TCTTAAGAAA
GACATCGCAA ATTTGACAAA TTTGAGCCCC ATAATCGACA GCATCGAAAC AGGCCATAAC
TGCCTGGCCG ATGCTTCATA TACACTTTCA GGTGTTAAGG CTTATGGTGC TGATACGGGA
CAAAAGATAG GGGTGATCAA AATTTTTGCT TCGAATGTCT CTGGTGTTGG CTTTACCATG
GCAGCACGAG AAAGCAACCA ATCCTTCTAC GCCACCTGGA TTGGTCAGAG CTACGGATAT
CCCCCGCGCT TTAATGATGC CGTATTGGTA GCAGGGCGAG GCCCCATCAT GCCTCATGGT
TCTCCGCCAG AAGGCTACAA CTATAGAATG ACGGCATCTA TTCAACTGTA TAAAACAGGT
GATATTGGTT CAGGCACCCT ATCGGGTAAA ATTGGCGCCC TTATTGCCTA CCACAACGCC
AACCCCCCAA GGTGGGCCAC CGAAATTCCC ATCTATATCA CCGGTACCAT AACCAAAGCG
ACCTGTTCTC TCACCAACAC CAGTATCAGC GTCCCCTTGG GTGATATCTC CGCCACCAAT
TTCTCCAGTA TTGGCGCCAC CTTTAGTGAA AAAAAATTCA ACGTGGACTT GAACTGTGAC
CCAGAGATTA AAGTCAGCGT TTCCCTGAGT GGAACCCAAA GCACCGAAAC CACAGATACC
AGCGTCCTGG CGCTGACCGG TGCCGGGCAA AGTGGCGTGG TTAGCGGGCT GGGGGTACAG
ATATTGTCTG ATGGGACATT GCTCAAGCGG GGTACCAACC TACTGGTTAA AACGGTGGCT
GGCGGTAAAG AATCCCTGCA GTTCAGTGCT CGTTACTACC AAACCAAAAA GGACGTCACC
GTTGGCAAAG CCAATACTGC CGCCACGCTG AATTTCACCT ATCAGTAA
 
Protein sequence
MNIPIKKRRL TIATTYCLKT RCLVAGVALM GLYSQQGLAF DCRPRTASIT LDLGNIDLKK 
DIANLTNLSP IIDSIETGHN CLADASYTLS GVKAYGADTG QKIGVIKIFA SNVSGVGFTM
AARESNQSFY ATWIGQSYGY PPRFNDAVLV AGRGPIMPHG SPPEGYNYRM TASIQLYKTG
DIGSGTLSGK IGALIAYHNA NPPRWATEIP IYITGTITKA TCSLTNTSIS VPLGDISATN
FSSIGATFSE KKFNVDLNCD PEIKVSVSLS GTQSTETTDT SVLALTGAGQ SGVVSGLGVQ
ILSDGTLLKR GTNLLVKTVA GGKESLQFSA RYYQTKKDVT VGKANTAATL NFTYQ