Gene Spro_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2872 
Symbol 
ID5603265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3151840 
End bp3152385 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content51% 
IMG OID640938413 
Productfimbrial protein 
Protein accessionYP_001479101 
Protein GI157371112 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CACTTCTGGT CACTTCATTG GCTACGATCG CATTATTTTC GACCGCTTCG 
GCATTTGCTG CTGACGGTAA CATCAACTTC ACGGGTGATA TCAAAGATGC AACCTGTGAG
GTCGATTTGG CTGCGGGAGC AACGGCGATC AGTGTCCCTA TGGGAACGCT GAATAAAACG
GCCTTTTCAG GGGCCGGCTC TACCGGTACC TCCAGCAAAT TCACCATCAA TCTGAAAAAT
TGCCCAACGG CCTACACCAA AGCCAACGTC GAATTTGACG GCACTGCGGC AGGCAACGAC
AAAAAAATAC TGGCTCTGAC CGCGGGCACC ACTGCCGCAC CTGCTGCTAC CGGGGTTGGG
ATCCAAATCA GCGATAAAAG CGACACCGTT TTGGCATTAA AAACTCCTTC TGCCAGCTAT
GACTTGAAGA CCGGTGCGAC AGACGTTAAC AAACTGGACT TTAGCGCGCG CTATGTTGCC
ACGTCAGCGA CAGTGACTTC CGGCGTAGCT AACTCCAGCG CTACTTTCAA CGTCAAGTAC
AACTAA
 
Protein sequence
MKKTLLVTSL ATIALFSTAS AFAADGNINF TGDIKDATCE VDLAAGATAI SVPMGTLNKT 
AFSGAGSTGT SSKFTINLKN CPTAYTKANV EFDGTAAGND KKILALTAGT TAAPAATGVG
IQISDKSDTV LALKTPSASY DLKTGATDVN KLDFSARYVA TSATVTSGVA NSSATFNVKY
N