Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2818 |
Symbol | |
ID | 5602652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3098944 |
End bp | 3100335 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640938359 |
Product | major facilitator transporter |
Protein accession | YP_001479047 |
Protein GI | 157371058 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.561944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000285964 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCAAGCT TGAATCAACA TCAAAAATCG GTCCTGATGG CGACCAGCCT CAGTTATGTC ATCGTTATTC TCGATACTTC GATTGTAAAC GTTGCTCTGC CGTCGATCGC TGGCGAACTT GGGGCAGGGT TGAGTGGCCT GCAGTGGGTA GTCAATGCCT ACACGTTGGC GTTTGCCAGC CTGTTACTGA GCGGCGGAGC ACTGGGGGAT CGGTTGGGGG CCACAAGGCT ATACCTTGGC GGGCTGGCGG TTTTTGCCGG CGCTTCGGTC ATTTGCGGCC TGGCTGAAAC CCTGCCCGTA CTGGTGGCGG CCAGAGTCTG CCAGGGGGTT GGCGCCGCGT TGCTGGTACC CAGTTCATTG ATGCTGCTTA ATGCGGCATT CGGCGATGCC AGGCTGCGGG CAGGGGCGAT TGGCGTGTGG GCCGGATGTG GTGGCGTGGC GATGGCGGCG GGACCGCTGG TCGGCGGCTT GCTTATCGAA CTATGGGGCT GGCGCAGCCT GTTTTGGATC AATCTTCCGG TGATTGTGCT GGGGATAGGT CTTACCCTGC GAATTGAAGT TCGGCGTCCG GTACCGGCCT TGCGACAAAT GGATTATGCC GGGCAGGGCG CGGTGATCCT GGCGTTAGCC AGCTCAGTGT GGGTGCTGAT CGAAGGCACC AGGCTTGGCT GGTGTTCTGG CTGGATCCTC GGCGGTATGG CTATCGCTGC TCTGAGTTGG TGGCGATTTG TGGTTATCGA ACGGCGGCAC CGGCAGCCGA TGCTGCCGCT GACATTGTTC CGTAGCACCC TGTTTTCTGC CTCTGCGCTG GTTTCGTTAG TCTCGGCGCT GGTGTTCTAC GGCGTATTTT TTCTGCTTAG CCTCTATTTT CAGCGGGTGC GAGGCTGGAC GCCATTACAG TCTGGCCTGG CGTTTCTCCC CCTGACGATG ATGGTCACGC TGGGCAGTTT TATTTCTGGC AGGCTGGTGC GGGCATGGGG GGGCGGGCGA GTGGTTTATT GCAGTTTGTT GCTCTATGCG CTGGGTTTTG TCGGTTTACT GGCGCTGGCG GAAAGCCCGC CCTACTGGCG CATTGCCTTG TCTTTTCCGT TGCTTGGTCT GGCGGCCGGT ATCATTACCC CGGCGGCCAC ATCGGCATTG ATGAATGATG TCGCGAATGA ACGGGCGGGG ATTGCAGCCG GCGTACTCAA TGCCGCCCGT CAGAGCGGTT CGGCCTTTGG CGTGGCCATC TTTGGGGCGC TGATGTCGAC CTCCCTTTCG CAGGCCGGCG GTATTCAGAC TGCGGTGTAC GGTGCCCTTG GGCTGTCATT ATTCACCGCC ATTGGTTGGC GTTTAGCGAT AAATTTAGCG GCTCGTCCAG GTGCGTCGGT GAGGAATGAG CAAAGAGAGT GA
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Protein sequence | MASLNQHQKS VLMATSLSYV IVILDTSIVN VALPSIAGEL GAGLSGLQWV VNAYTLAFAS LLLSGGALGD RLGATRLYLG GLAVFAGASV ICGLAETLPV LVAARVCQGV GAALLVPSSL MLLNAAFGDA RLRAGAIGVW AGCGGVAMAA GPLVGGLLIE LWGWRSLFWI NLPVIVLGIG LTLRIEVRRP VPALRQMDYA GQGAVILALA SSVWVLIEGT RLGWCSGWIL GGMAIAALSW WRFVVIERRH RQPMLPLTLF RSTLFSASAL VSLVSALVFY GVFFLLSLYF QRVRGWTPLQ SGLAFLPLTM MVTLGSFISG RLVRAWGGGR VVYCSLLLYA LGFVGLLALA ESPPYWRIAL SFPLLGLAAG IITPAATSAL MNDVANERAG IAAGVLNAAR QSGSAFGVAI FGALMSTSLS QAGGIQTAVY GALGLSLFTA IGWRLAINLA ARPGASVRNE QRE
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