Gene Spro_2740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2740 
Symbol 
ID5606945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3018335 
End bp3019117 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID640938281 
ProductABC transporter-related protein 
Protein accessionYP_001478969 
Protein GI157370980 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000193485 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAATCA GTGGAACGCT GCCCTTTATC AGCCTGCAGC AAGTCTGTCG GCGATATTCA 
TCACAGTCTG ACGGACTGAA ACCCACCGAC CTGAATCTTT ATCCGGAGGA ACGCGTCGGG
CTGGTAGGCT GCTCCGGCGC AGGGAAATCG ACGCTGCTCA GGCTGTTGCT GGCATTGGAA
ACTGCTGATG CCGGCCATAT CCTGTGCCAG GGTAATGCCG TCCACCCCAC CGCTGTGAAC
CCATTGCGCT GGTATCGACG TTTGGTGCAA TACGTCCCTC AGGATGCCCA TGCCTCACTT
AACCCGCGCC ACACGGTGGC CGAGTTGATT ATTGAACCTC TGCGTCAGCT GGCACCCAGG
CAGGATTTGA GCATTGCCGC TGAGCGGGCC TTGCGGCAGG TCGAATTGGA TGATCACCTG
ATACACGCCC GCCCCGGCCA GCTCTCCGGT GGGCAGGCAC AACGGGTGGC GCTGGCGCGT
GCTATCGCGC TACAACCCCG ATTTTTAATC GCCGATGAAC CGGTCAGCGG TCTGGATCTG
CCACTGCGTC AGCAGATCAT CGGCCTGCTG GACAAGATTA CTCGTCAACA AAATATGGGC
ATGCTGCTTG TCTCCCATGA TATTTCACTG GTCGCCGCCC TATGCCAACG AACGCTGGTG
ATGGCCTGCG GCGTCATCGT GGAAGATCGT CCAACCGATG AACTGCTGCG CAGCCCGCGA
CATGCCGCCA CCTGCGATCT GCTGGCCGCC ATTCCCTCGT TACCCGCCCT TTATCAGCCC
TGA
 
Protein sequence
MSISGTLPFI SLQQVCRRYS SQSDGLKPTD LNLYPEERVG LVGCSGAGKS TLLRLLLALE 
TADAGHILCQ GNAVHPTAVN PLRWYRRLVQ YVPQDAHASL NPRHTVAELI IEPLRQLAPR
QDLSIAAERA LRQVELDDHL IHARPGQLSG GQAQRVALAR AIALQPRFLI ADEPVSGLDL
PLRQQIIGLL DKITRQQNMG MLLVSHDISL VAALCQRTLV MACGVIVEDR PTDELLRSPR
HAATCDLLAA IPSLPALYQP