| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2625 |
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| Symbol | pspF |
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| ID | 5605218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 2888558 |
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| End bp | 2889565 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640938164 |
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| Product | phage shock protein operon transcriptional activator |
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| Protein accession | YP_001478854 |
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| Protein GI | 157370865 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.212931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.477628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAC AGTTAGAAAA CCTGTTGGGC GAAGCGAATG CCTTTGTCGA AGTATTGGAG
CAAGTCTCGC AACTGGCAAA GTTGAACAAA CCGGTGTTGG TGATCGGTGA GCGCGGCACC
GGTAAAGAAC TGATTGCCCA CCGGTTGCAT TACCTGTCCA ACCGTTGGCA GGGGCCGTTT
ATCTCGCTTA ACTGCGCGGC CCTGAATGAA AACCTGCTGG ACTCCGAGCT GTTCGGTCAC
GAGGCCGGGG CCTTTACCGG CGCGCAAAAG CGCCATCTGG GCCGCTTTGA ACGTGCCGAC
GGCGGCACGC TGTTTCTCGA CGAACTGGCC ACCGCCCCGA TGCTGGTGCA GGAAAAATTG
CTGCGGGTGA TTGAATACGG CCATCTGGAG CGCGTCGGCG GCAGCCAGCC GTTGCAGGTC
GATGTGCGGT TGGTGTGTGC CACCAACGAC GATCTTCCGG CACTGGCGGC GGCGGGCAAA
TTCCGCGCCG ACCTGCTGGA TCGGTTGGCA TTCGACGTAG TGCAGTTACC GCCGCTGCGC
CAGCGGCAGC AAGACATCAT GTTGCTGGCC GAGCACTTTG CGATTCAGAT GTGCCGTGAG
CTGTCGCTGA CACTGTTCCC CGGCTTTACC GAACGTGCCA GAGACACCCT GCTCGGCTAT
CACTGGCCGG GCAACGTGCG TGAGCTTAAA AACGTGGTGG AACGTTCGAT GTATCGGCAC
GGTACCAGCG ACAGCGCGTT GGATCAGATA GTCATCAACC CCTTCGCCCA ACGGGAAACT
ATGCCGCTGC CCATGGCGCG CGAAACGCCA ACTGAGCGGC CAGTCCTGCC GCTGGATTTG
AAAGCCTGGC AGTTGGCGCA GGAAAAATCG CTAATCGAAG CCGCACTTCA ACAGGGAAGA
TTTAATCAGC GTAAGGCGGC GGAGCTGCTG GGGCTGACCT ATCACCAATT ACGTGGCATG
TTGAAAAAGC ACGCGCTGTT GCAAAATGGC GAGGCAGAAG AGGAATAA
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| Protein sequence | MSEQLENLLG EANAFVEVLE QVSQLAKLNK PVLVIGERGT GKELIAHRLH YLSNRWQGPF
ISLNCAALNE NLLDSELFGH EAGAFTGAQK RHLGRFERAD GGTLFLDELA TAPMLVQEKL
LRVIEYGHLE RVGGSQPLQV DVRLVCATND DLPALAAAGK FRADLLDRLA FDVVQLPPLR
QRQQDIMLLA EHFAIQMCRE LSLTLFPGFT ERARDTLLGY HWPGNVRELK NVVERSMYRH
GTSDSALDQI VINPFAQRET MPLPMARETP TERPVLPLDL KAWQLAQEKS LIEAALQQGR
FNQRKAAELL GLTYHQLRGM LKKHALLQNG EAEEE
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