Gene Spro_2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2589 
Symbol 
ID5604635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2847148 
End bp2847870 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content58% 
IMG OID640938128 
Productshort chain dehydrogenase 
Protein accessionYP_001478818 
Protein GI157370829 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTC ACAACTCAGC CCCGGTGCTG ATTACGGGCG GCGCACGCCG GATTGGACTG 
GCATTGGCCA GGTCATTCTT GCAACGTGAT ATTCCCGTGA TCATTGCCTA TCGCAGCGAC
TACCCGGCGC TGGGCGAACT GAAAAGACTG GGGGCAACCT GCATTCAGGG CGATTTCTCA
ACGCACGACG GTATCTATCG TTTCGCCGAG CAGGTTCGCC AGGCAGCGCC CAAACTGCGC
GCGGTGATCC ACAACGCCAG CGCCTGGCAG GCCGAATCAC CGGAAGTACC ACCGGAGCAA
GTGATGGCGG CCATGTTGCA AATTCACGTT TATACGCCTT ATCTGCTCAA TCAACTGCTG
GAATCTTGTC TGTTGGGCCA GGGGCAAGCC GGTGCGGATA TCATCCATCT TACCGACTAT
GTGGTGGAGA AAGGCAGCGA CAAGCACATT GCCTATGCCG CCAGTAAGGC CGCGCTGGAC
AATATGACCC GCTCTTTTGC CCGCAAGCTG GCACCCGAAG TTAAAGTCAA CGCCATCGCC
CCGGCGCTGA TTATTTTCAA TCCGGGCGAC GACGAGCATT ATCGGCAACA GGCGCTGGCA
AAATCACTGA TGAAAATCGC CCCAGGCGAG AGCGAAGTGG TCAATCTGGT GAACTATCTG
CTGGACAGTC GCTATGTCAC CGGCCGTACC CACGGTGTCG ACGGCGGACG CCCGCTGCGC
TAA
 
Protein sequence
MELHNSAPVL ITGGARRIGL ALARSFLQRD IPVIIAYRSD YPALGELKRL GATCIQGDFS 
THDGIYRFAE QVRQAAPKLR AVIHNASAWQ AESPEVPPEQ VMAAMLQIHV YTPYLLNQLL
ESCLLGQGQA GADIIHLTDY VVEKGSDKHI AYAASKAALD NMTRSFARKL APEVKVNAIA
PALIIFNPGD DEHYRQQALA KSLMKIAPGE SEVVNLVNYL LDSRYVTGRT HGVDGGRPLR