| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2523 |
|---|
| Symbol | |
|---|
| ID | 5603873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2771616 |
|---|
| End bp | 2772977 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640938062 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001478752 |
|---|
| Protein GI | 157370763 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAA AAATCGTTTT AGTGGGTGCG GGCAGCGCGC AATTCGGCTA CGGCACGCTG
GGGGATATCT TCCAGAGCAA AACGTTGTAC GGCAGCGAAA TTGTGCTGCA TGACATCAAC
CCGGCCGCTC TGGCGGTGAC CGAGAAAACC GCCCGGGAAT TTTTGGCGGC GGAAGATTTA
CCCTTTACCG TCAGTGCCAC CACCGATCGT AAAACCGCGC TGCGCGGGGC GGAGTTTGTG
ATTATCTCCA TTGAGGTGGG CGACCGCTTT GCGCTGTGGG ATCTGGACTG GCAAATCCCG
CAGCAATACG GCATTGGGCA GGTGTATGGC GAAAACGGCG GCCCCGGCGG GCTATTCCAC
TCGCTGCGGA TTATTCCGCC GATCCTCGAC ATCTGCGCCG ACGTCGCCGA TATCTGCCCA
AATGCCTGGA TATTTAACTA TTCCAACCCG ATGAGCCGTA TCTGCACCAC CGTGCATCGT
CGCTTCCCGC AGCTCAATTT TGTCGGCATG TGCCACGAAA TTGCCTCGCT GGAGCGCTAT
CTGCCGGAAA TGCTCGGCAC TTCGTTTGAA AACCTCAACC TGCGGGCCGC CGGGCTTAAC
CACTTTAGCG TACTGCTGGA AGCCAGCTAC AAAGACAGCG GTAAAGACGC TTATGCCGAT
GTGCGTGCCA AGGCACCGGA TTATTTTTCC CGCCTGCCGG GCTACAGCGA CATTCTGGCT
TACACCCGTA CCCACGGCAA ACTGGTACAG ACCGAGGGCA GCACCGAGCG CGATGCGCTG
GGCGGTAAAG ACAGTGCCTA TCCCTGGGCC GACCGCACGC TGTTTAAAGA AATTCTGGAA
AAATTCCACC ACTTGCCGAT CACCGGCGAC AGTCATTTTG GCGAATACAT CCGCTGGGCC
AGTGAGGTCA GCGATCATCG CGGAATCCTC GATTTCTACA CCTTCTATCG CAATTACCTC
GGCCATGTGC AGCCGAAAAT AGAACTGAAG CTGAAAGAGC GCGTGGTGCC GATCATGGAA
GGGATCCTGA CCGATTCCGG CTATGAAGAG TCGGCGGTCA ATATCCCGAA CCTGGGGTTT
ATCAAACAAT TGCCGGAATT TATTGCGGTT GAAGTGCCGG CCATTATCGA TCGCAAGGGC
GTGCATGGCA TCAAGGTCAA TATGCCGGCC GGCATCGGTG GCTTGCTCAG CAATCAGATT
GCCATTCACG ATCTGACCGC CGACGCGGTC ATTGAAGGCT CGCGTGACCT GGTGATCCAG
GCGCTGTTGG TCGATTCGGT CAACGACAAG TGCCGGGCGA TCCCCGAACT GGTGGACGTG
ATGATTTCAC GCCAGGGGCC GTGGCTCGAT TACCTTAAAT AA
|
|---|
| Protein sequence | MATKIVLVGA GSAQFGYGTL GDIFQSKTLY GSEIVLHDIN PAALAVTEKT AREFLAAEDL
PFTVSATTDR KTALRGAEFV IISIEVGDRF ALWDLDWQIP QQYGIGQVYG ENGGPGGLFH
SLRIIPPILD ICADVADICP NAWIFNYSNP MSRICTTVHR RFPQLNFVGM CHEIASLERY
LPEMLGTSFE NLNLRAAGLN HFSVLLEASY KDSGKDAYAD VRAKAPDYFS RLPGYSDILA
YTRTHGKLVQ TEGSTERDAL GGKDSAYPWA DRTLFKEILE KFHHLPITGD SHFGEYIRWA
SEVSDHRGIL DFYTFYRNYL GHVQPKIELK LKERVVPIME GILTDSGYEE SAVNIPNLGF
IKQLPEFIAV EVPAIIDRKG VHGIKVNMPA GIGGLLSNQI AIHDLTADAV IEGSRDLVIQ
ALLVDSVNDK CRAIPELVDV MISRQGPWLD YLK
|
|---|
| |