| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2053 |
|---|
| Symbol | |
|---|
| ID | 5607094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2246509 |
|---|
| End bp | 2247546 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640937591 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001478284 |
|---|
| Protein GI | 157370295 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCA AGAAAACCAC CCTGGCCGCC ATTGCCAGAG AGGCACATGT TGGTATCGCT
ACGGTTGATC GGGTAATAAA CCAGCGCGCA ACAGTACGGC CGGAAACGGC ACGCAGGGTC
ATTGCGGCGG CGCACAAATT AGGCTTCGCA CTAGAGAAAT CGCATCAACT GTTTGAGACG
ATGGGCCAAC CAGCCGCACG GATTAAAATG GGCTTTATCC TGCTGCGCAA GGAACATTCG
TTCTACGCAC AATTGGCGGA TAGCCTGCTG GAACAGGCCG CACCCTATTA CGACGCTGAG
CACCCGCCAC AGTTCATGTT TCATGATATC AGTGCGGTCA GCGACACCGC TGCCGCCATC
ACACAGTTAA GCCAAAATGT GGATGTGATC GGCGTGCTGG CGCTGGATAA CCCGATGATC
CGTTTTGCGG TGGAAGAGGC TAGCAGGCAG GGGGTAAAGG TATTCACGTT GCTGTCTGAT
TTATCGGTAC ACAGCCGTGC CGGTTATATC GGCTGGGATA ACCAGCAGGC AGGTCGTACC
GCCGGCTGGG CGGTGGAGCG CTTGTGCCAT CGGCAGGGCG ATGTCGGGGT CATTATCGGC
GATAACCGTT TTCTGTGTCA GGAAACCTGC GAAATCAGCT TTCGATCTTA CCTGCGCGAA
CACCTGAGTG GTCTGCGGGT GCTTGAGCCG GTACGCAGTC ATGAACGGAC CGAAAGCGCA
AGACAAGTCA CTCAAACCTT GCTGGAGCAG CATCCCAATC TGGTGGCTCT GTATGCACCC
TGCGGGGGTG TGGAAGGGAT TATTGCTGCG CTGCGGGAAA GCGGCAGGCA GCATCAGGTG
ATGCTGATTT GCCATGGCCC GGTTACAGGT GGCGAAATGG CGCTGATCGA CGGCACGCTG
GATCTGATGC TCAGACATCG TATTGCCGAG TTTGCGGCGT CAGTCATCAG CACTTTTGTC
GCCGCCACCG TTGGCGGCTC CTCCGGTTTT AGTCACACCA TTAACCGCTT TGATCTGATC
ACCAAAGAAA ACCTCTGA
|
|---|
| Protein sequence | MAGKKTTLAA IAREAHVGIA TVDRVINQRA TVRPETARRV IAAAHKLGFA LEKSHQLFET
MGQPAARIKM GFILLRKEHS FYAQLADSLL EQAAPYYDAE HPPQFMFHDI SAVSDTAAAI
TQLSQNVDVI GVLALDNPMI RFAVEEASRQ GVKVFTLLSD LSVHSRAGYI GWDNQQAGRT
AGWAVERLCH RQGDVGVIIG DNRFLCQETC EISFRSYLRE HLSGLRVLEP VRSHERTESA
RQVTQTLLEQ HPNLVALYAP CGGVEGIIAA LRESGRQHQV MLICHGPVTG GEMALIDGTL
DLMLRHRIAE FAASVISTFV AATVGGSSGF SHTINRFDLI TKENL
|
|---|
| |