Gene Spro_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1944 
Symbol 
ID5606939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2128181 
End bp2129062 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content60% 
IMG OID640937482 
Productcopper resistance D domain-containing protein 
Protein accessionYP_001478175 
Protein GI157370186 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0029379 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTCTGG CGACCCTGTT TGTCCTGTGT CGCTTTGTGC ACTTTGCGGC GGTGATGCTG 
ATGTTTGGCA CCAGCCTGTT CACCGCCTTA TTGTCGCCGC AGCGCCTTTC CCCGTATCTC
ACCCGTGATG TGCGTCCTTT GTTGGTCTCT TGCACCTGGC TTGCCGGGCT TTCTGCCGTG
GCGCTGCTGG CTATTCAGGC CGGGCAGATG GGCGACGGCT GGGCCGATAC CTGGCGGCTA
GACGTGTGGT GGGCGGTACT GGGCACCACC TTCGGTGAGG TCTGGCGCTG GCATCTGGGC
ATTTCATTAT TGGCGTTGCT GAGCCTGTGG CTGGCAGAAC CGCGCCGCAC GCAGCTTTTG
GCATTGCTTT CCACACTGTT GCTGGTCAGC ATGGCATTCA TCGGCCATGC AGCAATGCAT
GATGGAGGGC TCGGCGTAGC GCATCGTTTT AACCACGCAC TGCATTTGTT GGCAGCCGGT
TACTGGTTTG GCAGCCTGCT GCCGTTGCTG GTTTGCCTGC GTTATCTGGC TCAACCGCAA
AGCCGCAGCG ATGCGGTCAC CACGCTGATA CGCTTCTCGC GTTGGGGCCA CCTGGCGGTT
GCGCTGGTGG TGTTGACCGG TGTGATCAAC AGTTTGATTA TTCTCGGCCG TTGGCCGCTG
GATGTCGATT CACCTTACCA GCGCCTGCTG CTGTTCAAAA CCGCACTGGT GGCACTGATG
GTGATGGTGG CGTTGGCCAA CCGTTACGCC ATCGTCCCCG CGATGAGCAG CATGCCGCAG
TTGGCACAGC GCGGGCTGGT GCTGGCCTGC TGGATTGAAG TGGGGTTGGG CGCGGGCGTG
CTGCTGCTGG TCAGTTTATT TGCAACTTAT GCGCCGGTGT AA
 
Protein sequence
MSLATLFVLC RFVHFAAVML MFGTSLFTAL LSPQRLSPYL TRDVRPLLVS CTWLAGLSAV 
ALLAIQAGQM GDGWADTWRL DVWWAVLGTT FGEVWRWHLG ISLLALLSLW LAEPRRTQLL
ALLSTLLLVS MAFIGHAAMH DGGLGVAHRF NHALHLLAAG YWFGSLLPLL VCLRYLAQPQ
SRSDAVTTLI RFSRWGHLAV ALVVLTGVIN SLIILGRWPL DVDSPYQRLL LFKTALVALM
VMVALANRYA IVPAMSSMPQ LAQRGLVLAC WIEVGLGAGV LLLVSLFATY APV