Gene Spro_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1939 
Symbol 
ID5606931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2124614 
End bp2125039 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content58% 
IMG OID640937477 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_001478170 
Protein GI157370181 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0082918 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGTTG TGACCTTACT AAACCAACAG CAGCTCCTGG CCATGCCGGA GTCTGATTAC 
ATGAACCCGG CGCAGCGGGC ATTTTTCCGC CAGCGCTTGC AGGACGAGCA ACAAAAACTG
TTGCAGCACA TTGAAGCGCT GAAGAGAGAT ATCGACGGCG GCGAGGTGTC CGGCGACGAA
GCGGACAAAG CCGCCCGCGA GGAAGACTTG CGATTGCTTT TCCGCCAGTT GGATCGTGAA
AGCCGCCTGC TGCCGAAAAT CAGCGCGGCG CTGACGCGAT TACATAACGG CGAATACGGC
TATTGCCGTG AAAGCGGCGA GCCTATCGGG CTGGCGCGCC TGTTGCTGCG GCCGACGGCG
GAGCTAAGCA TTGAAGCCAA AACCGCTCAG GAAATGCGTG AGCCACATCT GCGTAAACGG
GGTTAA
 
Protein sequence
MNVVTLLNQQ QLLAMPESDY MNPAQRAFFR QRLQDEQQKL LQHIEALKRD IDGGEVSGDE 
ADKAAREEDL RLLFRQLDRE SRLLPKISAA LTRLHNGEYG YCRESGEPIG LARLLLRPTA
ELSIEAKTAQ EMREPHLRKR G