| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1882 |
|---|
| Symbol | |
|---|
| ID | 5606247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2068156 |
|---|
| End bp | 2069391 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640937418 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001478113 |
|---|
| Protein GI | 157370124 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.123167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000918142 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCGG CACCCAAACT CATCAACTGG AAACGCAATC TTTTTGTCGC CTGGCTGGGG
TGTTTCCTCA CCGGTGCCGC CTTCAGTCTG ATCATGCCAT TCCTGCCGCT GTATGTAGAA
ACCCTCGGTG TTACCGGCCA CCAGGCACTG AATATGTGGT CTGGGCTGGT ATTTAGCATT
ACCTTCCTGT TCTCTGCGAT TGCCTCCCCA TTCTGGGGCG GTTTGGCCGA TCGCCGTGGG
CGCAAACTGA TGCTGTTACG ATCGGCATTG GGCATGTCGA TAGTGATGCT GCTGATGGGC
ATGGCGCAGA ATATTTGGCA GTTTTTGGCG CTACGCGCGG TGCTGGGCCT GCTCGGCGGT
TTTATCCCCA ACGCCAATGC GCTGATTGCC ACACAGGTGC CGCGCAATCG CAGCGGTTGG
GCACTGGGTA CCCTGTCCAC CGGCGGCGTC AGCGGTGCAT TGATTGGGCC GCTGATTGGC
GGCCTGCTAG CCGACCAGTA TGGCCTGAGG CCGGTGTTCT ACATTACCGC CGGTGTGCTG
CTGACCTGCT TTGTGCTGAC GCTGCTGTAT GTCAAAGAGC AGTTCACCCC GGTGCAGAAA
AAAGACATGC TGCACGCCCG TCAGGTCTTC GCGGCGCTAA AAAGCCCCAA GCTGATCCTC
AGCCTGTTTG TCACCACCAT GATTATTCAG ATTGCCACCG GATCCATCGC ACCGATCCTG
ACGCTGTACG TCCGTGATTT GGCCGGTGAC ATTCATAATC TGGCCTTTGT CAGCGGCCTG
ATCGCTTCAG TGCCGGGCGT CGCCGCGCTA ATGAGTGCGC CACGGCTGGG CAAACTGGGC
GACAGGATCG GCCCGGAGCG CATTCTGGTG TTTATGCTGA TCGTATCGGT GCTGTTACTG
ATCCCGATGG CGTTTGTGCA AACCCCGTGG CAACTCGGCG TACTTCGCTT CCTGCTAGGC
GCTGCCGATG GCGCACTGCT GCCGGCGGTA CAAACCTTGC TGATCTACAA CTGCACCAAT
CAGGTTGCCG GGCGGATCTT CAGCTATAAC CAATCGTTCC GCGATATCGG CAACGTCAGT
GGCCCATTAA TGGGGGCCGC CGTCTCCGCC AGTTATGGCT TCCGTGCAGT ATTCTGCGTC
ACCGCTCTGG TGGTGCTGTT CAACGCCGTT TATTCCTGGT GGTGTTTGCA ACGTCGCCCG
ACGCGAATGA GAGAAGACAC CCTGCAGGAA GAGTAA
|
|---|
| Protein sequence | MAPAPKLINW KRNLFVAWLG CFLTGAAFSL IMPFLPLYVE TLGVTGHQAL NMWSGLVFSI
TFLFSAIASP FWGGLADRRG RKLMLLRSAL GMSIVMLLMG MAQNIWQFLA LRAVLGLLGG
FIPNANALIA TQVPRNRSGW ALGTLSTGGV SGALIGPLIG GLLADQYGLR PVFYITAGVL
LTCFVLTLLY VKEQFTPVQK KDMLHARQVF AALKSPKLIL SLFVTTMIIQ IATGSIAPIL
TLYVRDLAGD IHNLAFVSGL IASVPGVAAL MSAPRLGKLG DRIGPERILV FMLIVSVLLL
IPMAFVQTPW QLGVLRFLLG AADGALLPAV QTLLIYNCTN QVAGRIFSYN QSFRDIGNVS
GPLMGAAVSA SYGFRAVFCV TALVVLFNAV YSWWCLQRRP TRMREDTLQE E
|
|---|
| |