| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1881 |
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| Symbol | |
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| ID | 5606246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 2066126 |
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| End bp | 2067679 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640937417 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001478112 |
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| Protein GI | 157370123 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0879055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00292537 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATCCT CTGTTAATAA CCAAGAAAGC CGGACCTTCT TCGGCCACCC TTATCCGCTG
GGATCCCTGT TCTTTACCGA AATGTGGGAG CGGTTCTCGT TTTACGGCAT TCGCCCATTA
CTGATCCTGT TTATGGCCGC GACGGTCTAC GACGGCGGCA TGGGGCTGGC ACGTGAGAAT
GCCTCGGCAA TTGTCGGTAT TTTTGCCGGC AGCATGTATC TGGCGGCCCT GCCGGGCGGC
TGGTTGGCCG ATAACTGGCT GGGCCAGCAA AAAGCGGTCT GGTACGGCTC GATTCTGATC
GCTCTCGGCC ACCTGTCGAT CGCGCTGTCC GCCTTTATGG GCAACAACCT GTTCTTCATC
GGCCTGATGT TTATTGTGTT GGGTTCCGGC CTGTTCAAAA CCTGTATCTC GGTGATGGTC
GGTACGCTCT ACAAGAAAGG CGACAACCGC CGCGACGGTG GCTTCTCGCT GTTCTATATG
GGCATCAACA TGGGCTCGTT TATCGCCCCG CTGATCTCTG GCTGGCTGAT TCGATCCCAC
GGCTGGCACT GGGGCTTCGG CATCGGTGGT ATCGGTATGC TGGTGGCGTT GGTGATCTTC
CGCGTCTTTG CCGTACCGGC AATGAAGCGC TATGACAGCG AAGTGGGCCT GGACTCCACC
TGGAACAGCC CGGTCGCCAA GAAAAACGGT GTCGGTGCCT GGCTGATTGC GCTGGCGGTC
GGCGTGGCAG TGGTTATCAC CCTGATTGCC CAGAGCATCA TTGTGATTAA CCCGGTAGCC
GTGGCCAGTA TGCTGGTTTA CGTGATTGCT GCTTCGGTCA CCCTGTACTT CATTTATCTG
TTTGTGTTTG CCGGTCTGAG CCGTAAAGAG CGCGCCCGCC TGTTGGTCTG CTTTATCCTG
CTGGTGTCAG CGGCCTTCTT CTGGTCAGCC TTCGAGCAGA AACCGACCTC GTTCAACCTG
TTCGCCAACG ACTATACCAA CCGGATGATT GGCGACTTCG AGATCCCGGC GGTGTGGTTC
CAGTCCATCA ACGCCCTGTT CATTATCCTG CTGGCACCGG TATTTAGCTG GGCATGGCCG
GCTCTGGCGC GTAATAAAGT GCGCCTGAGC AGTATCACCA AGTTTGTTAT CGGTATTCTG
TTTGCCGCTG CGGGCTTTGG CCTGATGATG CTGGCCGCAC AGAACGTGCT GAGCAACGGT
GGTGCCGGCG TATCTCCGTT GTGGCTGGTG GGCAGTATTT TGATGCTGAC GCTGGGCGAA
CTGTGCCTTA GCCCGATTGG GCTGGCAACC ATGACCCTGC TGGCACCGGA AAGAATGCGC
GGCCAAATGA TGGGCCTGTG GTTCTGCGCC AGCGCATTGG GTAACCTGGC GGCCGGTCTG
ATTGGCGGCC ATGTTAAAGC CGACCAGCTG GACATGCTGC CAGACCTGTT CGCACGCTGC
TCGATTGCCC TGCTGATCTG TGCTGCGGTG CTGACTCTGC TGATCGTCCC GATCCGCCGG
ATGATGGAAA ACACTCAGGG TAAAAGCGCA CAGAAACCGG CAACCAACGC CTGA
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| Protein sequence | MQSSVNNQES RTFFGHPYPL GSLFFTEMWE RFSFYGIRPL LILFMAATVY DGGMGLAREN
ASAIVGIFAG SMYLAALPGG WLADNWLGQQ KAVWYGSILI ALGHLSIALS AFMGNNLFFI
GLMFIVLGSG LFKTCISVMV GTLYKKGDNR RDGGFSLFYM GINMGSFIAP LISGWLIRSH
GWHWGFGIGG IGMLVALVIF RVFAVPAMKR YDSEVGLDST WNSPVAKKNG VGAWLIALAV
GVAVVITLIA QSIIVINPVA VASMLVYVIA ASVTLYFIYL FVFAGLSRKE RARLLVCFIL
LVSAAFFWSA FEQKPTSFNL FANDYTNRMI GDFEIPAVWF QSINALFIIL LAPVFSWAWP
ALARNKVRLS SITKFVIGIL FAAAGFGLMM LAAQNVLSNG GAGVSPLWLV GSILMLTLGE
LCLSPIGLAT MTLLAPERMR GQMMGLWFCA SALGNLAAGL IGGHVKADQL DMLPDLFARC
SIALLICAAV LTLLIVPIRR MMENTQGKSA QKPATNA
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