| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1861 |
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| Symbol | |
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| ID | 5605976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 2045647 |
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| End bp | 2047011 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640937396 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001478092 |
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| Protein GI | 157370103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TATCCCCCCT GATGTTATGC CTCGCAGCCC TGCTCAGTAC CGGCTGCGGT
AATGCGTTGA AAAGCGAATA TCAATCTCCG AAGGTGGACT ATCCGACCCA ATGGCAACCC
AGTGCCGATG CCGCTACGTC AGTCCCTTTT GCCTGGCACG ATTTCCACGA TCCCCAGCTA
GAACGCTGGC TACAACAGGT GATGCTGGCT AATAACGATC TGGCCGCTGC CGCATTGCGT
GTCTATCGTG CCCAGTTGAT GGCCCAACGG GTCGACATCG GCACCGCTCC CAGCGTAAAC
GCGACGCTCA ATACCGGCGC CAGCACCGCC CTGTCCAATT CGTCCCCGTG GAATAAAAAC
AGCAGCGCTA GCCTCGGCGT CAGCTATGAG GTCGATCTGT GGGGCAAACT GGCAAGACAG
CGTGATGCCG CAGAATGGGC CAGTCAGGCA ACTCAACAAG ATTTGCAAAG TGCGCGTTTG
GCATTGCTCG CCAACGCCAG CAAAAATTAC TGGCGCCTCG GTTTTATCAA TCAAAGGATC
GGCGTCAGTC AGCAAAATAT CGCTTACTCC AGGCAGACCT TAGAGTTGGT CAATGCCCGC
TACCGTGCCG GCAGCATCTC TTCACTGGAC GTGGTGGATG CCGAGCAGAA TCTGATCAAT
CAGGAGAGCA GCCATCTGGC GCTGTTACGT GAGCGTCAGC AAGCCTTGAA CGAACAAACC
GTGTTATTGG GCTCACCACC GGGCAAGGCT TTGGTTGAAC CCGCCCGTTT ACCCACCGGC
CCGCTGCCGC AAATCAATGC CGGTATCCCG GTCAACGTGC TGCGCCACCG GCCGGATATC
AGCGCCAAAG AGTTGCGGCT GCGTGAAGCA TTGGCCAACG TCGATGTAAA GCGTACCCAG
TACTATCCGG CATTTAGCCT GACCGGTTCA TTGGGTGCCA GCAGTACCGC CTTGCTGGAA
TTTTTGCGCA ATCCGTTGGC CTCGGTGGGG GCTGGGTTGT CGCTGCCGTT CCTTGAATGG
CGGCAGATGG ATGTGGATAT CAAAATTGCC CGCAGTGACT ACGAGCTGCA GGTGCTGGAA
TTCAAACAGG CGCTGTATAA GGCCATGGCC GATGTGGCCG ATGCCCTGTC GCTGCGTAGC
CAATTGATAG CTCAGGAAAA ACACTTACGG GCTTCGTTAG CCTTGGCGCA AAAATCTGAA
CGCTTGAATG AGAGCCGCTA CCGGCAAGGT GCCGTCCCCA TCAGCTTCTG GCTGGATGCG
CAAAATCGCC GCAGGCTGGC AGAACTGGCG CTGGATGAAA ACCGTTTCGG CCAATATCAG
AACCTGGCGC AACTCTATCT GGAATTTGGC GGCTCAGCTC AATAA
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| Protein sequence | MKILSPLMLC LAALLSTGCG NALKSEYQSP KVDYPTQWQP SADAATSVPF AWHDFHDPQL
ERWLQQVMLA NNDLAAAALR VYRAQLMAQR VDIGTAPSVN ATLNTGASTA LSNSSPWNKN
SSASLGVSYE VDLWGKLARQ RDAAEWASQA TQQDLQSARL ALLANASKNY WRLGFINQRI
GVSQQNIAYS RQTLELVNAR YRAGSISSLD VVDAEQNLIN QESSHLALLR ERQQALNEQT
VLLGSPPGKA LVEPARLPTG PLPQINAGIP VNVLRHRPDI SAKELRLREA LANVDVKRTQ
YYPAFSLTGS LGASSTALLE FLRNPLASVG AGLSLPFLEW RQMDVDIKIA RSDYELQVLE
FKQALYKAMA DVADALSLRS QLIAQEKHLR ASLALAQKSE RLNESRYRQG AVPISFWLDA
QNRRRLAELA LDENRFGQYQ NLAQLYLEFG GSAQ
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