Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1808 |
Symbol | |
ID | 5605243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1992358 |
End bp | 1994013 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640937340 |
Product | putative dehydrogenase subunit |
Protein accession | YP_001478039 |
Protein GI | 157370050 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000111783 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000501686 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAC CTGTATTTAC CGCCGATGGC AACGTCTCGG CCGATATTGT GATCGTAGGC TCCGGCATCG TCGGCGGCAT GATGGCCGAT CAATTGGTCA GCCAGGGTTA TTCTGTGCTG GTGCTGGAAG CGGGCTTGCG CATCGAACGC GGCCAGGCGG TAGAGAACTG GCGCAATATG CCTTTTGACA ACCGCGCCGG CTCAGATTAC CAGGGGCTGT ATCCACAATC TGAATTCGCC ACCGCGCCGC TCTACTTCCC GGAAAACAAC TATGTTGCGC TGAGCGGCCC GAGCGCCGGC AGTTTCAAGC AGGGTTATCT GCGCACCGTC GGCGGCACCA CCTGGCACTG GGCCGCCTCC TGCTGGCGCC ACCTGCCCAG TGATTTCCAA ATGAAAACGC TGTACGGCGT TGGCCGCGAC TGGCCGATTT CCTACGACGA GCTGGAACCC TACTATTGCC GGGCCGAAGA AGAAATTGGC GTCGCCGGCC CCAACGATCC GCAACAGCAG TCCCCGGTTG AGCGCAGCAA ACCTTACCCG ATGGATATGG TGCCCTGGGC TCACGGCGAC ATCCGCTTTG CCGAGGTGGT AAACCCGCAT GGTTACCGCT CCGTTCCCAT CCCACAGGGG CGCAGTATCC ATCCGTGGAA AGGCCGGCCG ACCTGCTGCG GTAACAATAA CTGCCAACCC ATTTGCCCGA TAGGCGCCAT GTACAACGGC ATTCATCATA TTGAACGTGC TGAAATGAAA GGTGCGGTGG TGCTGGCCGA AGCGGTGGTC TACAAGATCG ACACCGATGA GCAAAATCAG GTGACGGCAG TCCATTGGCT GGACAACAAA AAACAGTCCC ACCGGGCCAC GGCCAAAGCT TTTGCGTTAG CCTGTAACGG CATAGAAACC CCGCGCCTGC TGCTGATGGC GGCTAATGAG CGCAATCCCA ACGGTATCGC CAACGCTTCC GATCAGGTGG GCCGCAATAT GATGGACCAT TCGGGCTTTC ACTGTACCTT CCTGGCGAAA GAACCGCTGT GGCTGGGGCG TGGCCCGGCA CAAAGCAGTT GTCTGGTTGG CCCACGTGAC GGTGAGTTTC GCAAAGACTA CTCGGCCAAC AAAATGATCC TCAACAATAT CAACCGGGTG GTACCGGCTA CCCAGCAAGC GTTGGAAAAA GGTCTGGTCG GCAAAGAGTT GGACGCCGAA ATCCGCCGAC GCGCCGCCTA TGGCGTCGAT TTATCCATCA GCCTGGAACC GTTACCAGAC CCCAACAACC GCCTGACCCT GAGTAAAACC CGGAAAGATG CTCATGGCCT GCCTTGCCCG GACATCCACT ACGACGTCGG CGACTATGTG CGTAAGGGCG CAGAGGCCGC GCATAAACAG TTGGAGCACA TCGGCCAACT GTTTGATGCC GATGAATTCA ACATCACCAC CAGCCTGAAC GCCAATAACC ATATTATGGG TGGCACCATC ATGGGCCACA GCCCCGAAGA CTCGGTGGTA GACGGCAATT GCCGTACTCA TGACCATGCC AACCTTTGGT TGCCGGGCGG CGGTGCCATT CCCTCCGCCA GCGTGGTGAA CAGCACCCTG ACCATGGCCG CATTGGGCAT CAAGGCCGCC GATGATATTG CGCGCCAGCT GGCGGTGAAA TCATGA
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Protein sequence | MKKPVFTADG NVSADIVIVG SGIVGGMMAD QLVSQGYSVL VLEAGLRIER GQAVENWRNM PFDNRAGSDY QGLYPQSEFA TAPLYFPENN YVALSGPSAG SFKQGYLRTV GGTTWHWAAS CWRHLPSDFQ MKTLYGVGRD WPISYDELEP YYCRAEEEIG VAGPNDPQQQ SPVERSKPYP MDMVPWAHGD IRFAEVVNPH GYRSVPIPQG RSIHPWKGRP TCCGNNNCQP ICPIGAMYNG IHHIERAEMK GAVVLAEAVV YKIDTDEQNQ VTAVHWLDNK KQSHRATAKA FALACNGIET PRLLLMAANE RNPNGIANAS DQVGRNMMDH SGFHCTFLAK EPLWLGRGPA QSSCLVGPRD GEFRKDYSAN KMILNNINRV VPATQQALEK GLVGKELDAE IRRRAAYGVD LSISLEPLPD PNNRLTLSKT RKDAHGLPCP DIHYDVGDYV RKGAEAAHKQ LEHIGQLFDA DEFNITTSLN ANNHIMGGTI MGHSPEDSVV DGNCRTHDHA NLWLPGGGAI PSASVVNSTL TMAALGIKAA DDIARQLAVK S
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