Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1798 |
Symbol | |
ID | 5605193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1977765 |
End bp | 1980968 |
Gene Length | 3204 bp |
Protein Length | 1067 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640937330 |
Product | ImcF domain-containing protein |
Protein accession | YP_001478029 |
Protein GI | 157370040 |
COG category | [S] Function unknown |
COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.516304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAGAGG CTTCTTCCAG ACCGGTCAAA AAGAAAATAA CGCCCCGGCT GCCGCTCAAG GCGGACATCA GCAGCCATCT CCGTCGCCGC TATAACCTCT TCTGGCGAAG TAAAGTCCGC CTGCTGTTAG TCACAGGCGA TGAAAACGCC ATCGCTCAGT TGGTGCCCAA CCTGCAAGCC CTTCAGTGGC TGGAAGGTAA CCGCACGGTC TTGATTTACG GCGGCAGCCT GACCTCTGAA CCCGACGAAA AAAAATACAC CTCCCTGCGC AAGCTGCGAC GTGGTCGTCC TCTGGACGGC ATCGTGCGCG TAATTGGCGA AGGCCAGAGT ATTACGCCGC AGATGAGCGA TAGTGATCTG CGCGGTCTGG AAAAAATCAG CGAACTGCTG CGCTATTCCG CCCCGGTTTG GCTGTGGCAA CTGTGTGACA GCAACTGGTT GCAGGCGACG CGCTCTGAAC AGGCGGTAGG GGCAAGCTTT CCGCAACACG CTAATGCAGA CGATGTTACC AGCCAGCTTG AGCTGCTGCT GCCGGCGCTA CGGGCCCAGG GCGTGAGCCA GGTCGCTGAG AACAACAGCC GCGACTTTCT GCTGCGCCTG GGCCAGCACC TTAAAGACGG CGGTATTGCC CGTTGGGCTC AGCAACTGGT GCCATGGCTC TCTGCCTCCC AGCAGCGCGT TCCGCTGCGT GGCCTGATGT TCAGCCTGCC GGAGAATAAA CCCACTGATA CGTCAGAGGG AACAGCCGGC GCTGCATTTG CCGACGCTGA GAAATATGTT CCTGAATCAC AATGTCATGC GCTGACCCTG CCGGTGACCT GGCAGGGTAT TGTTGAAGAC TGCACCCGTG TGCGTGGCCG CCGTGTCGGT ATGGCCTGGG AGCAGACGCT GGCATGGGGC ATTATGGCTG CGCTCGGTAT CTGGGGCACC GGGCTGCTGC TCTCTTTTGC CCTGAACTAT AGTCATATTT CTTCTGTAGC GAACAAAGCC CGTTCTCTGG TCGAGCATCC CTCTGTTTCT GACTCTCAAC TGACGGCCCT GCATGACCTG CGTAACGATG CCGGCCGCTT GCAACATCAT GTTCAGGGCG GTTCACCCTG GTACCAGCGC TTTGGGCTTG ACCATAACCC GCAACTGTTG AGTGCGATGC TCCCGTGGTA TGGCGTGGCG AACAACCGCC TGATCCGCGA CCCGGCCAAT GCTGCCCTGA TGCAGAAACT GACTGCGCTG ACAAATTCGG CACCTAACAG CGACCAGCGC GCACAGCTGG CGAAATCCGG TTATGACCAA CTGAAAGCCT GGTTGATGAT GTCCCGCCCG GACAAAGTGG ATGGCGCGTT CTACGCCCAA ACAATGCAAA GGGTGCAACC CACCCGGCAG GGGATTTCCA CCGGATTGTG GCAGAGCCTT GCGCCAGACT TGTGGGCGTT CTCTATATCT GGGTTGCTGG AACAGCCCCA GTGGAAAATC ACCCTGGATA CGGCGCTGGT CAGCCAGAGC CGCCAGGTGC TGTTGCAGCA GATTGGTCGC CGTAATGCGG AGGGAACCCT CTACGAAAAC ATGCTCAAAT CGGTGCGGCG TAACTTTGCC GATGTGTCAC TGGAAGACAT GACCAGTGGG ACCGATGCCC GCCGTCTGTT CTCCAGCGAT GACGTGGTGC CGGGGATGTT CACCCGTCAG GCCTGGGAAG GGGGCATTCA GCAGGCCATC GAGAAAGCGG CAAACTCGCG CCGGGATGAA ATTGACTGGG TGTTGAGCGA CAGTCGCAAG ACCGTTTCTG CCGACCTTTC TCCGGAAGCG CTGAAAGCGC GTCTGACGCA GCGTTATTTC ACTGATTTTG CCGGCAGCTG GTTGAACTTC CTCAACAGCC TGCGGCTGAA TCCGGCGCAC AACATTGCGG ATGTGACTGA CCAACTGACA TTGATGAGCG ATGTGCGTCA GTCGCCGATG ATTGCGCTGA TGAATACGTT GGCCTGGCAG GGACAAGCCG GCGAGCTGCG CGAAGGGCTG TCGGATTCCA TTATCAAGTC GGCAAAAGAT CTGCTCGGTA GTGAGGATAA GCCCGTTATC GATCAGCGTG CAGCCGGGCC GCAGGGACCG CTGGATGACA CTTTCGGGCC GCTGCTAACC CTGATGGGGA AAAACCAGGC CAGCAACCTA ATGTCGGCCG ACAGCACGCT GAGCCTGCAA ACCTACCTCA CTCGTATCAC CCGTGTGCGT CTGCGCCTGC AACAGGTGGC GAGTGCTAAC GATCCGCAGG AGATGATGCA GGCCCTGGCA CAGACCGTAT TCCAGGGCAA AAGTGTGGAT CTGACCGATA CCCAGCAGTA CGGCAGCCTG GTGGCGGCCA GTTTGGGTGA GGAATGGAGC GGTTTTGGCA ACACCCTGTT TGTGCAGCCG CTGACGCAGG CCTGGGAAAC CGTACTGCAA CCGTCTGCAG CCAGCCTGAA CGCCCGCTGG AGCCGTTCAG TGGTAGCAAA CTGGCATACC GCCTTTGAGG GGCGCTTCCC GTTTGCCGCG AGCAAAAGCG ACGCTTCCCT GCCGATGCTG GCGGAGTTTA TCCGCAAGGA CACCGGGCGT ATCGACCGTT TCCTGACCGC TGAACTCAGC GGCGTGTTGC ATAAAGAAGG CAGCAGGTGG GTGCCGAACC GTACTAACAG CCAGGGGCTG ACGTTTAACC CGGCATTTCT GAAAGCGTTA AATCAGCTGA GCCAGTTATC CGACATTCTG TTTACCGACG GCAGTCAGGG CATCAGCTTC GAATTACAGG CCCGCCCGGT ACCGCAGGTG GTGGAAACCC AGCTAACGAT TGACGGGCAG CAGTTGCATT ACTTCAACCA GATGGCCGAC TGGCAGTCCT TCCGCTGGCC GGGGGATACC TTCAAGCCCG GCGCGATGCT GACCTGGACT TCAACCAGCG CCGGTACACG TCTGTTCGGG GATTACAGTG GCACCTGGGG CTTCATTCGC TGGCTGGAGC AGGGCAAGCG GAAACAGCTT GATCGCAGCC AGTGGATGAT GAGTTTTACC GCTCCGGATG GTCGCACGCT GCAGTGGGTT CTGCGTTCCC AACTGGGCAA AGGGCCGCTG GCGTTGCTGG CGTTACGCGG TTTCAGGCTT CCTGAGCAGA TATTCAGCGT GGATGCCGCC ACTGCACAGG CGCTGACCGG CACAGAGAAT TCAGCCATGG AGGGGATGGA ATAA
|
Protein sequence | MGEASSRPVK KKITPRLPLK ADISSHLRRR YNLFWRSKVR LLLVTGDENA IAQLVPNLQA LQWLEGNRTV LIYGGSLTSE PDEKKYTSLR KLRRGRPLDG IVRVIGEGQS ITPQMSDSDL RGLEKISELL RYSAPVWLWQ LCDSNWLQAT RSEQAVGASF PQHANADDVT SQLELLLPAL RAQGVSQVAE NNSRDFLLRL GQHLKDGGIA RWAQQLVPWL SASQQRVPLR GLMFSLPENK PTDTSEGTAG AAFADAEKYV PESQCHALTL PVTWQGIVED CTRVRGRRVG MAWEQTLAWG IMAALGIWGT GLLLSFALNY SHISSVANKA RSLVEHPSVS DSQLTALHDL RNDAGRLQHH VQGGSPWYQR FGLDHNPQLL SAMLPWYGVA NNRLIRDPAN AALMQKLTAL TNSAPNSDQR AQLAKSGYDQ LKAWLMMSRP DKVDGAFYAQ TMQRVQPTRQ GISTGLWQSL APDLWAFSIS GLLEQPQWKI TLDTALVSQS RQVLLQQIGR RNAEGTLYEN MLKSVRRNFA DVSLEDMTSG TDARRLFSSD DVVPGMFTRQ AWEGGIQQAI EKAANSRRDE IDWVLSDSRK TVSADLSPEA LKARLTQRYF TDFAGSWLNF LNSLRLNPAH NIADVTDQLT LMSDVRQSPM IALMNTLAWQ GQAGELREGL SDSIIKSAKD LLGSEDKPVI DQRAAGPQGP LDDTFGPLLT LMGKNQASNL MSADSTLSLQ TYLTRITRVR LRLQQVASAN DPQEMMQALA QTVFQGKSVD LTDTQQYGSL VAASLGEEWS GFGNTLFVQP LTQAWETVLQ PSAASLNARW SRSVVANWHT AFEGRFPFAA SKSDASLPML AEFIRKDTGR IDRFLTAELS GVLHKEGSRW VPNRTNSQGL TFNPAFLKAL NQLSQLSDIL FTDGSQGISF ELQARPVPQV VETQLTIDGQ QLHYFNQMAD WQSFRWPGDT FKPGAMLTWT STSAGTRLFG DYSGTWGFIR WLEQGKRKQL DRSQWMMSFT APDGRTLQWV LRSQLGKGPL ALLALRGFRL PEQIFSVDAA TAQALTGTEN SAMEGME
|
| |