Gene Spro_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1798 
Symbol 
ID5605193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1977765 
End bp1980968 
Gene Length3204 bp 
Protein Length1067 aa 
Translation table11 
GC content59% 
IMG OID640937330 
ProductImcF domain-containing protein 
Protein accessionYP_001478029 
Protein GI157370040 
COG category[S] Function unknown 
COG ID[COG3523] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.516304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGG CTTCTTCCAG ACCGGTCAAA AAGAAAATAA CGCCCCGGCT GCCGCTCAAG 
GCGGACATCA GCAGCCATCT CCGTCGCCGC TATAACCTCT TCTGGCGAAG TAAAGTCCGC
CTGCTGTTAG TCACAGGCGA TGAAAACGCC ATCGCTCAGT TGGTGCCCAA CCTGCAAGCC
CTTCAGTGGC TGGAAGGTAA CCGCACGGTC TTGATTTACG GCGGCAGCCT GACCTCTGAA
CCCGACGAAA AAAAATACAC CTCCCTGCGC AAGCTGCGAC GTGGTCGTCC TCTGGACGGC
ATCGTGCGCG TAATTGGCGA AGGCCAGAGT ATTACGCCGC AGATGAGCGA TAGTGATCTG
CGCGGTCTGG AAAAAATCAG CGAACTGCTG CGCTATTCCG CCCCGGTTTG GCTGTGGCAA
CTGTGTGACA GCAACTGGTT GCAGGCGACG CGCTCTGAAC AGGCGGTAGG GGCAAGCTTT
CCGCAACACG CTAATGCAGA CGATGTTACC AGCCAGCTTG AGCTGCTGCT GCCGGCGCTA
CGGGCCCAGG GCGTGAGCCA GGTCGCTGAG AACAACAGCC GCGACTTTCT GCTGCGCCTG
GGCCAGCACC TTAAAGACGG CGGTATTGCC CGTTGGGCTC AGCAACTGGT GCCATGGCTC
TCTGCCTCCC AGCAGCGCGT TCCGCTGCGT GGCCTGATGT TCAGCCTGCC GGAGAATAAA
CCCACTGATA CGTCAGAGGG AACAGCCGGC GCTGCATTTG CCGACGCTGA GAAATATGTT
CCTGAATCAC AATGTCATGC GCTGACCCTG CCGGTGACCT GGCAGGGTAT TGTTGAAGAC
TGCACCCGTG TGCGTGGCCG CCGTGTCGGT ATGGCCTGGG AGCAGACGCT GGCATGGGGC
ATTATGGCTG CGCTCGGTAT CTGGGGCACC GGGCTGCTGC TCTCTTTTGC CCTGAACTAT
AGTCATATTT CTTCTGTAGC GAACAAAGCC CGTTCTCTGG TCGAGCATCC CTCTGTTTCT
GACTCTCAAC TGACGGCCCT GCATGACCTG CGTAACGATG CCGGCCGCTT GCAACATCAT
GTTCAGGGCG GTTCACCCTG GTACCAGCGC TTTGGGCTTG ACCATAACCC GCAACTGTTG
AGTGCGATGC TCCCGTGGTA TGGCGTGGCG AACAACCGCC TGATCCGCGA CCCGGCCAAT
GCTGCCCTGA TGCAGAAACT GACTGCGCTG ACAAATTCGG CACCTAACAG CGACCAGCGC
GCACAGCTGG CGAAATCCGG TTATGACCAA CTGAAAGCCT GGTTGATGAT GTCCCGCCCG
GACAAAGTGG ATGGCGCGTT CTACGCCCAA ACAATGCAAA GGGTGCAACC CACCCGGCAG
GGGATTTCCA CCGGATTGTG GCAGAGCCTT GCGCCAGACT TGTGGGCGTT CTCTATATCT
GGGTTGCTGG AACAGCCCCA GTGGAAAATC ACCCTGGATA CGGCGCTGGT CAGCCAGAGC
CGCCAGGTGC TGTTGCAGCA GATTGGTCGC CGTAATGCGG AGGGAACCCT CTACGAAAAC
ATGCTCAAAT CGGTGCGGCG TAACTTTGCC GATGTGTCAC TGGAAGACAT GACCAGTGGG
ACCGATGCCC GCCGTCTGTT CTCCAGCGAT GACGTGGTGC CGGGGATGTT CACCCGTCAG
GCCTGGGAAG GGGGCATTCA GCAGGCCATC GAGAAAGCGG CAAACTCGCG CCGGGATGAA
ATTGACTGGG TGTTGAGCGA CAGTCGCAAG ACCGTTTCTG CCGACCTTTC TCCGGAAGCG
CTGAAAGCGC GTCTGACGCA GCGTTATTTC ACTGATTTTG CCGGCAGCTG GTTGAACTTC
CTCAACAGCC TGCGGCTGAA TCCGGCGCAC AACATTGCGG ATGTGACTGA CCAACTGACA
TTGATGAGCG ATGTGCGTCA GTCGCCGATG ATTGCGCTGA TGAATACGTT GGCCTGGCAG
GGACAAGCCG GCGAGCTGCG CGAAGGGCTG TCGGATTCCA TTATCAAGTC GGCAAAAGAT
CTGCTCGGTA GTGAGGATAA GCCCGTTATC GATCAGCGTG CAGCCGGGCC GCAGGGACCG
CTGGATGACA CTTTCGGGCC GCTGCTAACC CTGATGGGGA AAAACCAGGC CAGCAACCTA
ATGTCGGCCG ACAGCACGCT GAGCCTGCAA ACCTACCTCA CTCGTATCAC CCGTGTGCGT
CTGCGCCTGC AACAGGTGGC GAGTGCTAAC GATCCGCAGG AGATGATGCA GGCCCTGGCA
CAGACCGTAT TCCAGGGCAA AAGTGTGGAT CTGACCGATA CCCAGCAGTA CGGCAGCCTG
GTGGCGGCCA GTTTGGGTGA GGAATGGAGC GGTTTTGGCA ACACCCTGTT TGTGCAGCCG
CTGACGCAGG CCTGGGAAAC CGTACTGCAA CCGTCTGCAG CCAGCCTGAA CGCCCGCTGG
AGCCGTTCAG TGGTAGCAAA CTGGCATACC GCCTTTGAGG GGCGCTTCCC GTTTGCCGCG
AGCAAAAGCG ACGCTTCCCT GCCGATGCTG GCGGAGTTTA TCCGCAAGGA CACCGGGCGT
ATCGACCGTT TCCTGACCGC TGAACTCAGC GGCGTGTTGC ATAAAGAAGG CAGCAGGTGG
GTGCCGAACC GTACTAACAG CCAGGGGCTG ACGTTTAACC CGGCATTTCT GAAAGCGTTA
AATCAGCTGA GCCAGTTATC CGACATTCTG TTTACCGACG GCAGTCAGGG CATCAGCTTC
GAATTACAGG CCCGCCCGGT ACCGCAGGTG GTGGAAACCC AGCTAACGAT TGACGGGCAG
CAGTTGCATT ACTTCAACCA GATGGCCGAC TGGCAGTCCT TCCGCTGGCC GGGGGATACC
TTCAAGCCCG GCGCGATGCT GACCTGGACT TCAACCAGCG CCGGTACACG TCTGTTCGGG
GATTACAGTG GCACCTGGGG CTTCATTCGC TGGCTGGAGC AGGGCAAGCG GAAACAGCTT
GATCGCAGCC AGTGGATGAT GAGTTTTACC GCTCCGGATG GTCGCACGCT GCAGTGGGTT
CTGCGTTCCC AACTGGGCAA AGGGCCGCTG GCGTTGCTGG CGTTACGCGG TTTCAGGCTT
CCTGAGCAGA TATTCAGCGT GGATGCCGCC ACTGCACAGG CGCTGACCGG CACAGAGAAT
TCAGCCATGG AGGGGATGGA ATAA
 
Protein sequence
MGEASSRPVK KKITPRLPLK ADISSHLRRR YNLFWRSKVR LLLVTGDENA IAQLVPNLQA 
LQWLEGNRTV LIYGGSLTSE PDEKKYTSLR KLRRGRPLDG IVRVIGEGQS ITPQMSDSDL
RGLEKISELL RYSAPVWLWQ LCDSNWLQAT RSEQAVGASF PQHANADDVT SQLELLLPAL
RAQGVSQVAE NNSRDFLLRL GQHLKDGGIA RWAQQLVPWL SASQQRVPLR GLMFSLPENK
PTDTSEGTAG AAFADAEKYV PESQCHALTL PVTWQGIVED CTRVRGRRVG MAWEQTLAWG
IMAALGIWGT GLLLSFALNY SHISSVANKA RSLVEHPSVS DSQLTALHDL RNDAGRLQHH
VQGGSPWYQR FGLDHNPQLL SAMLPWYGVA NNRLIRDPAN AALMQKLTAL TNSAPNSDQR
AQLAKSGYDQ LKAWLMMSRP DKVDGAFYAQ TMQRVQPTRQ GISTGLWQSL APDLWAFSIS
GLLEQPQWKI TLDTALVSQS RQVLLQQIGR RNAEGTLYEN MLKSVRRNFA DVSLEDMTSG
TDARRLFSSD DVVPGMFTRQ AWEGGIQQAI EKAANSRRDE IDWVLSDSRK TVSADLSPEA
LKARLTQRYF TDFAGSWLNF LNSLRLNPAH NIADVTDQLT LMSDVRQSPM IALMNTLAWQ
GQAGELREGL SDSIIKSAKD LLGSEDKPVI DQRAAGPQGP LDDTFGPLLT LMGKNQASNL
MSADSTLSLQ TYLTRITRVR LRLQQVASAN DPQEMMQALA QTVFQGKSVD LTDTQQYGSL
VAASLGEEWS GFGNTLFVQP LTQAWETVLQ PSAASLNARW SRSVVANWHT AFEGRFPFAA
SKSDASLPML AEFIRKDTGR IDRFLTAELS GVLHKEGSRW VPNRTNSQGL TFNPAFLKAL
NQLSQLSDIL FTDGSQGISF ELQARPVPQV VETQLTIDGQ QLHYFNQMAD WQSFRWPGDT
FKPGAMLTWT STSAGTRLFG DYSGTWGFIR WLEQGKRKQL DRSQWMMSFT APDGRTLQWV
LRSQLGKGPL ALLALRGFRL PEQIFSVDAA TAQALTGTEN SAMEGME