| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1790 |
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| Symbol | |
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| ID | 5605119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1968619 |
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| End bp | 1970997 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640937322 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001478021 |
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| Protein GI | 157370032 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCAA ACCCGATTTC TTTTTTCAGC CATAACCACC ACCTGCTGGC GATAAAAGGA
TGTGAGTCAG AACTTGATGT GCTGGCGTTT GAAGGCAACG AGGCCCTGAG CAAGCCGTTC
AGTTACCGCA TTGAGTTCAC CAGTAACGAC CACACCATCA GCAAGGAAAT GATGCTGATG
AAAGCGGGCT CTTTGACGCT ACAGGCCCCG GCAGACCAGG GGTACGGCAT TAAAATTCAG
CAATCGGTAC GGGTTCTCCA GGGGGTGGTG AGCGGTTTTG AACGTCTCAA CACCTCAAAA
GATGAAACCC ATTACGCCCT GACGCTACAG CCGCGTCTGG CATTGCTCGA CCGCTCGCAT
CAGAACGCGG TTTATCAGGA TATGTCGGTG CCGCAGATTG TGGAAAAAAT CCTGCGCGAG
CGCCACAACC TGCGCGGCCA GGATTTTCTG TTCTCGCTGA CCAGAGAATA CCCGCGGCGT
GAACAGGTGA TGCAGTACGG CGAGGATGAC CTGCACTTTA TCACCCGCCT GCTGGGTGAG
GTGGGTATCT GGTTCCGCTT TACCACCGAC ACGCGCCTGA ACATCGACGT GGTGGAGTTC
TACGACAGCC GGCAGGGCTA CGAGAAAGGC CTGATTCTGC CGTCTGTACC GCCGTCGGGC
CAGCACTCGC AAGGCATGGA TTCGGTATGG GGGATGGAGA GCTATCACAA CGTGGTGCAA
AAGCAGGTCA GCACCCGCGA TTACAACTAC CGCCAGGCCA ACAACGACAT GAACACCCAG
GTGGATGCGA CCCGCGGTGA CAGCACCACC TACGGCGAGG CTTATCACTA TGCCGACAAC
TACCTGACAC CGGGCAGTAC CTATGACCGC AATCCGGCCC CGGAGTCCGG GGCGTTTTAT
GCCCGTATAC GTCACGAACG CTACCTGAAC GGCCAGACCC AACTGAGCGC CATCACCAGT
TGCCCGACAC TGGCGCCCGG ACTGGTACTG AAAGTCACCG GCGGTTATGA AGTGACGGAG
GCGTTCAGCC AGGGTGTGCT CATCACCGGG ATGAAAAGCG CGGCCCGCCG AGATAAAGAT
TTTGAGGTGC ATTTCAGCGG TATCCCGGAC AGCACCGATT TTGGCTTCCG CCCTGAACCC
GGTGCGCGTC CGGTAATGGC CGGCACTTTA CCAGCCCGCG TCACCAGTAC CACCGAAAAT
GACACCTACG GGCATATCGA TAAAGATGGC CGCTATCGCG TCAACATGCT GTTTGACCGT
GATAACTGGG AGACCGGGTT CGAGAGCCTG TGGGTGCGTC AGTCCCGCCC CTATGCCGGC
GACACTTATG GTCTGCACCT GCCGCTGCTG GCGGGAACCG AGGTGGCGAT TGGTTTTGAA
GACGGCAACC CGGACCGGCC CTATATTGCC GGGGTGCTGC ACGACTCCGC GCACGACGAT
CACGTCACCA TCCGCAACTA CAAGCGCAAC GTACTGCGCA CACCGAGCAA CAACAAAATC
CGCCTCGATG ACAGCCGGGG CCAGGAACAT ATCAAGATCT CGACGGAGTA TGGCGGCAAG
AGCCAGCTGA ATCTCGGGCA TCTCGTCGAT AGCGAGAAGC AAAAACGGGG CGAGGGTTTT
GAACTCAGAA CCGACAGCTG GGGCGCGATT CGGGCGCAGA AGGGCATTTT CATCAGTGCC
GATGGTCAGG CAAAGGCGCA GGGCCAGGTG CTGGAGATGG AGCCAGCGAT CAGCCTGCTA
AAAGGGGCGC TAAATCAGGT AACCGGATGG GGAACTATTA CGCAGACGCA CCATAATATT
GCTCCTGATG CAGAGCCACT AAGAGAATTT GTTTCCGGTG CCAGCGAGCT TAAAGAACCT
GCGTTGCTGC TGTCTGCTCC GAAGGGGATT GCCGCCGTCA CGCCGGAAAC GACTCTGATA
CACAGTGGGA AAGGGCTGTA CCTGCAGAGC CTGGGCGAAG TCAATATCAG CACAGCACAG
CGCTATTCGG TAAACGCCAG TAAGGCAATC TCGATTCTCT CGCAACAGGA AGGAATACGC
CTGGTCTCTG CCAAAGGCCC GCTGGCGGTG GAATCCCACG CGGATACGCT GTCACTCACA
TCGATGAAGG ATGTCACGGT TCAGTCCACC CAGGGGCACC TGCAACTGAC GGCAAAGAAT
GGGATCACGC TTGCCTGTGG CGGTGCTTAC ATCCAACTGA CCCCACAGGG CGAAATCAAC
GTGCATGGTC CAGGTCTGCT AAGTCTCAAA GGGCAGCACA AATTACAGGG CCCGACGAGT
GAGGATTATC CGCTGCCTGA ATTGCCTTCG TCGGTGTGCA AAGAGTGTCT GAAAAAGGCG
CAGCAGGCTG CACAAGGCTT TGTGCCAAGG GAGGTATAA
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| Protein sequence | MSANPISFFS HNHHLLAIKG CESELDVLAF EGNEALSKPF SYRIEFTSND HTISKEMMLM
KAGSLTLQAP ADQGYGIKIQ QSVRVLQGVV SGFERLNTSK DETHYALTLQ PRLALLDRSH
QNAVYQDMSV PQIVEKILRE RHNLRGQDFL FSLTREYPRR EQVMQYGEDD LHFITRLLGE
VGIWFRFTTD TRLNIDVVEF YDSRQGYEKG LILPSVPPSG QHSQGMDSVW GMESYHNVVQ
KQVSTRDYNY RQANNDMNTQ VDATRGDSTT YGEAYHYADN YLTPGSTYDR NPAPESGAFY
ARIRHERYLN GQTQLSAITS CPTLAPGLVL KVTGGYEVTE AFSQGVLITG MKSAARRDKD
FEVHFSGIPD STDFGFRPEP GARPVMAGTL PARVTSTTEN DTYGHIDKDG RYRVNMLFDR
DNWETGFESL WVRQSRPYAG DTYGLHLPLL AGTEVAIGFE DGNPDRPYIA GVLHDSAHDD
HVTIRNYKRN VLRTPSNNKI RLDDSRGQEH IKISTEYGGK SQLNLGHLVD SEKQKRGEGF
ELRTDSWGAI RAQKGIFISA DGQAKAQGQV LEMEPAISLL KGALNQVTGW GTITQTHHNI
APDAEPLREF VSGASELKEP ALLLSAPKGI AAVTPETTLI HSGKGLYLQS LGEVNISTAQ
RYSVNASKAI SILSQQEGIR LVSAKGPLAV ESHADTLSLT SMKDVTVQST QGHLQLTAKN
GITLACGGAY IQLTPQGEIN VHGPGLLSLK GQHKLQGPTS EDYPLPELPS SVCKECLKKA
QQAAQGFVPR EV
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