Gene Spro_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1783 
Symbol 
ID5606270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1958949 
End bp1959446 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content53% 
IMG OID640937315 
Producthypothetical protein 
Protein accessionYP_001478014 
Protein GI157370025 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.309687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACT CCTATCAGTC CGAGATCCCC AAAGCTCGCG TCAACATAAA ACTTGATCTG 
CACACCGGTG GTGCCCAGAA GAAAACCGAA TTGCCCCTCA AGCTGATGGT GGTGGGGGAT
TACAGTAACG GCACGGAACA ACGCCCGGTG TCTGAGCGTG AAAAGGTCAA CGTTAATAAA
AACAATTTTG ACAGCGTGTT GGCCGAATTT TCTCCCTCCG TAAATATTTC CGTTGAAAAT
ACCCTGGCCG GTGATGGCAG CGAAGAGAAC GTCAGCCTGA CTTTCCGTGA GATGAACGAT
TTCACGCCGG AGCAGGTAGC CCGCCAGATC CCCCAGCTTA AAGCCATGCT TGCCATGCGC
AATCTCCTCC GCGACCTCAA GGCCAACCTG TTGGATAACC AGGCTTTCCG CAAAGAGCTG
GAAAAAATCC TGCTCGACCC GGCGCTTAGC GCTGAACTGC GCAGTGAGCT GTCTGCTCTG
GCACCGAAGC AAGCATAA
 
Protein sequence
MSNSYQSEIP KARVNIKLDL HTGGAQKKTE LPLKLMVVGD YSNGTEQRPV SEREKVNVNK 
NNFDSVLAEF SPSVNISVEN TLAGDGSEEN VSLTFREMND FTPEQVARQI PQLKAMLAMR
NLLRDLKANL LDNQAFRKEL EKILLDPALS AELRSELSAL APKQA