| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1650 |
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| Symbol | rumB |
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| ID | 5604092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1805993 |
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| End bp | 1807120 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640937182 |
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| Product | 23S rRNA methyluridine methyltransferase |
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| Protein accession | YP_001477882 |
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| Protein GI | 157369893 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.401467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTGCG CTTTGTATAC GGCGGGCACC TGCCGTTCCT GTCAGTGGTT GGAAAAGCCG
TACCCGCAGC AACTGACGGA CAAACAGCAT CATCTGCAAT CACTGCTGAG CGACCGAGAC
GTTGCGCAGT GGCTAGAGCC GATCGCCGGC GAGCAGAGCG CATTTCGCAA TAAAGCCAAA
ATGGTAGTCA GCGGCAGCGT AGAGCGTCCG CTACTGGGCA TGCTGCATCG TGACGGCACG
GCGGTGGATC TGAGCGCCTG TCCACTGTAT CCCGCCAGTT TCTCGCCGAT GTTTGATGTG
CTGAAAAGTT TTATCGCCCG CGCCGGCCTG ACGCCCTACA ACGTGGCGCG TAAACGTGGC
GAACTGAAGT ACCTGTTACT GACTGAAAGT ACTCACAGTG GTGGCGTAAT GCTGCGCTTT
GTACTTCGTT CAGACAACAA GCTGGCGCAA CTGCGTGCCG CACTGCCGTG GCTGCAACAG
CAGTTGCCGC AGCTCAGGGT GATTTCCGCC AATATTCAGC CGGTACATAT GGCGATTATG
GAAGGGGAGC GCGAGATCCC GCTGACCGAG CAACAGGCGC TGGAAGAGCA ATTTAACCAG
GTGCCGTTGT ATATCCGCCC GCAAAGTTTC TTCCAGACCA ATCCGCAGGT GGCCGCCGAG
CTTTACGCCA CCGCCCGTGA CTGGGTGCGG GCACTGGCTA TCGACAGTAT GTGGGATCTG
TTCTGCGGTG TGGGTGGGTT TGGCCTGCAT TGCGCGCTGC CGGAAACACG CCTGACCGGC
ATCGAAATTA GCGCCGAGGC GATTGCCTGC GCGCGCCAAT CGGCGAAAAC TCTGGGTTTG
CAACACGTCG ATTTCCAGGC GCTGGATTCT ACCCGGTTCG CTACCGCCGA AGGCAGCGTG
CCGCAACTGG TGCTGGTTAA TCCGCCGCGA CGCGGTATTG GCAAGGCACT GTGCGACTAT
CTGAACCAGA TGGCACCGGG CTATATTCTG TATTCGAGCT GTAACGCCGA GAGCATGGCG
AAAGACATTG AGATGTTGCC GGATTACCGC ATCGAGCGCG TCCAGCTGTT TGATATGTTC
CCGCATACCG CCCATTACGA AGTACTGACG CTGCTGGTTC GTAATTAA
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| Protein sequence | MHCALYTAGT CRSCQWLEKP YPQQLTDKQH HLQSLLSDRD VAQWLEPIAG EQSAFRNKAK
MVVSGSVERP LLGMLHRDGT AVDLSACPLY PASFSPMFDV LKSFIARAGL TPYNVARKRG
ELKYLLLTES THSGGVMLRF VLRSDNKLAQ LRAALPWLQQ QLPQLRVISA NIQPVHMAIM
EGEREIPLTE QQALEEQFNQ VPLYIRPQSF FQTNPQVAAE LYATARDWVR ALAIDSMWDL
FCGVGGFGLH CALPETRLTG IEISAEAIAC ARQSAKTLGL QHVDFQALDS TRFATAEGSV
PQLVLVNPPR RGIGKALCDY LNQMAPGYIL YSSCNAESMA KDIEMLPDYR IERVQLFDMF
PHTAHYEVLT LLVRN
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