Gene Spro_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1617 
Symbol 
ID5603835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1771856 
End bp1772680 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID640937149 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001477849 
Protein GI157369860 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.114854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TAGCCATTAT TGGCCTGGGT TGGTTGGGTA TGCCGCTGGC TCTGTCGCTG 
ATGAGCCGTG GGTTTGACGT TGTTGGCAGT AAAACCACGC CGGATGGCGT CGAGGCCGCA
CGGATGAGCG GGATCGAATG CTATCAGCTG GAACTGACGC CGGAACTGAT TTGCGAACCG
GAGGATCTGG AGGCGCTGCT GCGCGTCGAT GCGCTGGTGA TAACACTCCC AGCCCGCCGC
ACCGTCGAAG GCAGCGAAAA CTATTTTAAT GCGGTGCGCA TGCTGGTGGA CAGCGCGATG
GCCTTCGGTG TGCCGCGCAT TCTGTTTACC AGTTCAACCT CGGTGTACGG GGAAACCACG
GGCACGGTAC GCGAAGATTC GCCGCTGAAG CCGGTTTCAC CTTCCGGCCT GGTGCTGGCA
GAGCTGGAGC GTTGGCTGCA TGAACTGCCG AACACCTCGG TGGATATTTT GCGTCTGGCG
GGGCTGGTGG GGGGCGATCG CCATCCCGGG CGTTTCCTAG CGGGCAAAGT CGATGTCAAA
GGCGGTTCGC AAGGAGTCAA TCTGGTGCAT CAGGACGACG TGATCGGCGC GATCCAACTG
TTGCTGAAAC TGCCGAAAGG CGGCCACGTT TATAACCTGT GCGCCCCGGC CCATCCCACC
AAGCGTGAGT TCTACCCGGC TCTGGCCGAA CAGTTAAATC TGTCGCCGCC GCAGTTTGCC
GCCGAGACGG AGCAGGGCGG TCGTCTGGTG GACGGCAGCC GTATCTGCAA TGAACTGGGG
TTTGAATATC AGTACCCGGA TCCGGCGCGT ATGCCGGTCA ACTAA
 
Protein sequence
MKKVAIIGLG WLGMPLALSL MSRGFDVVGS KTTPDGVEAA RMSGIECYQL ELTPELICEP 
EDLEALLRVD ALVITLPARR TVEGSENYFN AVRMLVDSAM AFGVPRILFT SSTSVYGETT
GTVREDSPLK PVSPSGLVLA ELERWLHELP NTSVDILRLA GLVGGDRHPG RFLAGKVDVK
GGSQGVNLVH QDDVIGAIQL LLKLPKGGHV YNLCAPAHPT KREFYPALAE QLNLSPPQFA
AETEQGGRLV DGSRICNELG FEYQYPDPAR MPVN