| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1603 |
|---|
| Symbol | |
|---|
| ID | 5603755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1756838 |
|---|
| End bp | 1757986 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640937135 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001477835 |
|---|
| Protein GI | 157369846 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000602977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.073151 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG TATTGATAGG CACAACAGCA AACTGCGTTA TCGGTTTCAG AGCAGATCTG
ATTAAGTCAT TGCATCAGCA AGGGCATATT GTTTACGCAT TTGCGCTTGA TTATGATGAT
AAAAGCCGCA AGCAGGTCGC CGCATTGGGT GCCACGCCAG TGAATTATCG TTTCAGTCGT
ACAGGTCTTA ACCCGATAAA GGACCTCTAT GATACTTATA CACTCAGTAA ACAGTTGAAA
AGCATTGCGC CAGATCTTGT GTTTTCTTAT TTTTCAAAAC CATGTATCTT CGGAACGCTA
GCTGCGGTCC TTGCAGGCGT CAAGAAACGT TACGCGATGC TCGAAGGTTT GGGCTATGTG
TTCACTGAAC AACCTCAAGG GGTTAGCTGG AAAGTTAATC TACTGAAGAA AACCCAGACA
ACACTATACC GTTTAATTTT TCCCAAGCTA GATGCTTTAA TTTTATTGAA TCCAGACGAT
CGCAACGATC TATTAGTTAA GTCAGGCATA AAAGTAAAAA GAGCTCATGT GTTAGGTGGG
ATAGGCCTTA AACTAACTGA TTATCCCTTT AGCCCTACTC CAACAGAGCC GGTATCATTT
ATTTTTATCG CTCGCCTTCT GGCGGAAAAA GGGGTACACG AGTATGTTAC AGCGGCCAAA
GCAGTTAAAC AGCGTTATCC TGATATTCAG TTTTATATGC TAGGAGCCGT CGATAAGCAA
AACCCTGGCA GCCTGACTGA AAACAGCCTC AAAAAACTGA TAGAAGATGA CGTTATTATT
TACCCTGGTC ACGTTTCGAA TGTGCAAGAG TGGATAAAAA AATCCAGTGT TTTCGTTCTA
CCATCATATT ATAGAGAAGG AATCCCCCGC AGCACTCAAG AAGCAATGGC CATGGGCAGA
GCGGTGCTTA GCACTGATGT GCCAGGATGC CGCGAAACTG TCATTCACGG GGTCAATGGG
TTTTTAATCC AACGCTGGTC CCCCGAAGAA TTGACCGCAC GTATGATTGA GTTAATAGAA
GATCCCGCAA AAATCGTTGA GATGGGACTC GCAAGTTACC AGTTGGCGCA ACAAAAATTT
GATGCTCATG AAGTCAATGG TCGCTTATTG GAGATGCTCG AGATCCCACA GAATAAGACT
CAAGATTAG
|
|---|
| Protein sequence | MKIVLIGTTA NCVIGFRADL IKSLHQQGHI VYAFALDYDD KSRKQVAALG ATPVNYRFSR
TGLNPIKDLY DTYTLSKQLK SIAPDLVFSY FSKPCIFGTL AAVLAGVKKR YAMLEGLGYV
FTEQPQGVSW KVNLLKKTQT TLYRLIFPKL DALILLNPDD RNDLLVKSGI KVKRAHVLGG
IGLKLTDYPF SPTPTEPVSF IFIARLLAEK GVHEYVTAAK AVKQRYPDIQ FYMLGAVDKQ
NPGSLTENSL KKLIEDDVII YPGHVSNVQE WIKKSSVFVL PSYYREGIPR STQEAMAMGR
AVLSTDVPGC RETVIHGVNG FLIQRWSPEE LTARMIELIE DPAKIVEMGL ASYQLAQQKF
DAHEVNGRLL EMLEIPQNKT QD
|
|---|
| |