Gene Spro_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1454 
Symbol 
ID5607193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1586966 
End bp1587535 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content59% 
IMG OID640936986 
ProductXRE family transcriptional regulator 
Protein accessionYP_001477686 
Protein GI157369697 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.513852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACG GATTGGAAAG TGCCGATCTC AGACTGGCGC AGCGACTGTC TGATTTACGC 
CAGCAGCAGG GCTGGTCGCT GGAGGAATTG GCTCAGCAAA CCGGCATCAG CCGGGCGACG
TTGTCGCGGG TCGAACGCGC TGAAACCAGC CCGACTGCTT CATTGTTAAA CAAACTGTGC
TCGGCCTATG GGTTGACCAT GTCACGACTG CTGAGCGAGG TCGAGGACGA GCCGCCGGAG
TTGCTGCATC GTGAGCAGCA GACGGTATGG GTGGACCGCG CAAGCGGTTT TCATCGCTGT
TCGGTATCAC CGCCTGCTGC CTTGTATAAG GCCGAGTTTA TTGAATGCAC ACTCGAGGCC
GGGGCGGTGA TTGCCTATGA CGCACCCTCG ATACATGCGC TTGAGCACCA TTTGTGGCTG
CTGGCAGGGC GGCTCGAACT GACGCTGGAG GGGCGCACCT TCCAGCTTGA GCCGGGTGAC
TGCCTGCGTT ATCGGCTGTT CGGCGCTTCA AAATTTCATG CCTCCGGCCC TGAGCCGGCC
CACTACACCC TTGTTATCAG CAGGCCTTAA
 
Protein sequence
MDNGLESADL RLAQRLSDLR QQQGWSLEEL AQQTGISRAT LSRVERAETS PTASLLNKLC 
SAYGLTMSRL LSEVEDEPPE LLHREQQTVW VDRASGFHRC SVSPPAALYK AEFIECTLEA
GAVIAYDAPS IHALEHHLWL LAGRLELTLE GRTFQLEPGD CLRYRLFGAS KFHASGPEPA
HYTLVISRP