Gene Spro_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1387 
Symbol 
ID5606206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1515543 
End bp1517033 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content56% 
IMG OID640936919 
Productcytoplasmic alpha-amylase 
Protein accessionYP_001477619 
Protein GI157369630 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA AAACCACGTT GCTGCAGTTT TTCCATTGGT ACTACCCCGA TGGCGGTAAG 
TTATGGCAGG AAGCCGCCGA ACGCGCCGCG CAAATTGCGC AGTTGGGCAT CACCGATCTG
TGGCTGCCCC CCGCTTATAA GGGGGCTTCC GGCGGCTATT CGGTGGGTTA CGACAGTTAT
GATCTGTTCG ATCTGGGCGA GTTTGATCAA AAAGGCAGCC GTGCCACCAA ATACGGCGAC
AAAGAAGCGT TGGCAAACGC CGCGACTACG CTACGCGACA ACGGCGTGCG GGTGATTTAT
GACGTGGTTT TCAACCATAA ACTTGGTGCC GACGAAAAAG AACAGGTTCA CGTCTATAAG
GCGGATGCCA ACAACCGCAA CGATATTAAT GACCAGGGCT TCGACGCCCT GGCCTACACC
CGCTTCACTT TCCCCGGCAG ACAAGGCACC TATTCCAAAT TCATTTGGGA TTACAAATGC
TTTGGCGGGG TTGATTACGT TGAGCAGCCC GATGAAAAAG GCGTGTTCAA AATCGCCAAT
GACTACGGCG ACGACGGCTG GAACGAGCAG GTCGGTGATG AGAAAGGCAA CTACGATTAT
CTGATGGGGG CGGACGTCGA ATTCCGCAAC CCGGCGGTGG TGGAAGAGCT GAAATACTGG
GCGCGCTGGC TGCTGGAAAC CCTGCCCTGC GATGGCTTCC GGTTGGATGC CGCCAAACAC
ATTCCGGCCT GGTTCTTTAA AGAGTGGGCT GACCACGTGC GTGACAGCGC ACAGTGCGAT
CTGTTTATTG TCGCCGAATA CTGGTCGCAC GATTTGGCCG CGTTGCAACA GTATATTGAC
CTGGTCGAGG GCAAAGTGAT GCTGTTCGAT GTAGCCTTGC ACCTGAAGTT TCATCAGGCA
TCGAAACAGG GAGACGGGTT CGACATGGCG CAGATTTTCA CCGATACCCT GACCGCGGCC
GATCCGGCCC ATTCGGTCAC GCTGGTCGCC AACCACGACA CGCAGCCGTT ACAATCGCTG
GAAGCACCGG TCGAACCCTG GTTCAAACCG CTGGCCTACG CCCTTATCCT GTTGCGCGAA
CAAGGCGTGC CCTGCGTGTT CTATCCTGAC CTGTACGGTG CCAGCTATAA AGATAAAGGC
AGCGACGGCC AGGAATACCA GATTGATATG CCGGTCATCC CTGAGCTGGA AAAGTTGATT
CAGGCGCGAC AACGCTTTGC CAACGGCGTG CAAACCGATT ATTTTGATGA TAAAAACTGC
GTGGCCTTCA GCCGCAGCGG TACCGCCGAC GCCCCTGGTT GCGTAGTGGT GCTCACCAAC
GGGGCTGAAA GTGGCAAAGC GGTTTCGCTG GGCACTGAAC TGGCACATAA AAACTGGCGC
GACCTGCTCG GTAACCGTCA GGATGAGGTC ACCACCGACG AACAGGGGAA TGCCACTTTC
CCGGTTAACG GCGGCAGCGT CAGCGTTTGG GTACTGGCAG AAACCCTGTA G
 
Protein sequence
MTKKTTLLQF FHWYYPDGGK LWQEAAERAA QIAQLGITDL WLPPAYKGAS GGYSVGYDSY 
DLFDLGEFDQ KGSRATKYGD KEALANAATT LRDNGVRVIY DVVFNHKLGA DEKEQVHVYK
ADANNRNDIN DQGFDALAYT RFTFPGRQGT YSKFIWDYKC FGGVDYVEQP DEKGVFKIAN
DYGDDGWNEQ VGDEKGNYDY LMGADVEFRN PAVVEELKYW ARWLLETLPC DGFRLDAAKH
IPAWFFKEWA DHVRDSAQCD LFIVAEYWSH DLAALQQYID LVEGKVMLFD VALHLKFHQA
SKQGDGFDMA QIFTDTLTAA DPAHSVTLVA NHDTQPLQSL EAPVEPWFKP LAYALILLRE
QGVPCVFYPD LYGASYKDKG SDGQEYQIDM PVIPELEKLI QARQRFANGV QTDYFDDKNC
VAFSRSGTAD APGCVVVLTN GAESGKAVSL GTELAHKNWR DLLGNRQDEV TTDEQGNATF
PVNGGSVSVW VLAETL