Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1181 |
Symbol | |
ID | 5602829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1298717 |
End bp | 1300165 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640936702 |
Product | diguanylate cyclase |
Protein accession | YP_001477413 |
Protein GI | 157369424 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA GAATAAGCGA CAAACATGGC TTGCCTGTGG CTATCCAGCT GATTACGCTT TTTCTGCTGG CATTTTTGCT TTCCCTGCTG GGTATTTTTA CCCGCCCAAT AGGATCGCTT TCTCTGTTTT GGCCGGTGAA TGCGATTTTA CTCGGTCTGC TATTACGCAA ACCCGCCTAT GCGAGTCCGG CCGGTTGGCT GGCTATCTAT ATTGGGATGA TCGCCGCAGA TTTGGCCAAC GGTGAGAGTC TGTCGCTGGC GATGTGGTTG AACGCCTGCA ATATGTCGCT GATTGCTACC GGTTACGGCG TGATGTCGCT GTTGCCAAAG TCGCAACGCC GGATGGGTAA ACCCCAGACT ACCCTTTATA TGTTTACCGC CAGCCTGAGT AGCGCGGCGG TGGCGTCGAC CTTATCGATA CTGCGTAATG ACAGCCTGTA CAACAACACG GCCGTTATCG CCTGGTTAGC CTGGTTCAGC GAGCAGTTCT CGACCAATCT GCTGTTGTTG CCGGTGCTGC TGGCGGCACC GCGTCTCAAA CAGCTGTTGC GTATGCAGAT CAACTGGCAA CTGCGTGCCA GTATGCCGCT GCTGGCGTTG CTGTTTTCAC TGGTGTTCAG TGTGTATATC GGCGGTCCAG GGGCGATTGC CTTCCCCATT CCGGCGCTGC TGTGGTGCGC GGTGCGCTAC CAACTGTTCA CGGTAACCTT GTTGACGCTG CTGACTGGGA TGACCGAGAT CAGCAGTATC TCCGCCAATC TGATGCTGTA TGAAACGCCC AACAACCACA TTGCCTTCCT CGACACGCTG ATGTCAGCCC GTTTGGGGAT CGCCATGCTG GTGATGGGTC CACTGATCCT TGCCAGTTCA ATTGCCGTTA ACCGTAAGCT GCTGCGGCGG CTGGAGCACA GCGCCAATCA CGATTTTCTG ACCGGCGTAC TGGCGCGTAA TGCACTAACG CGCAAGGCTG GCGAACTGCT GGAGCACAAG CATAAATCGA AGGAGGCGGT GTCGCTGCTG CTGATCGATA TCGATCATTT TAAGCAGATC AATGATACCC ATGGGCATCT GGTGGGCGAT CAGGTACTGG CTTCATTCGC CCATATTGTG CGGCGCGAGT TGCGTCACGA TCAGCTGTTT GGCCGTTTGG GTGGGGAAGA GTTTGCCATT ATGCTGCCGC GGGCGCTGGC GGCGCAGGGG GTGGCACTGG CAGAGCATTT GCGGCAATTG GTACAAAAAG CCGATTTGCT CCCCACTGGC AAGGTGCCGT TGAACATCAC CATCAGCGTT GGCGTCGCCA GTCTGGGGAT GAACGAAGTT AAATCGCTGG AACAGTTAAT GAATATGGCG GATATCGCGC TTTATCGCGC CAAGTCGCAG GGGCGTAACC GGGTGGAGTC GTTTAACGCG GTAAGTGGCA ACAGCGTTGG CCACATCATG TTTAAATAA
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Protein sequence | MNARISDKHG LPVAIQLITL FLLAFLLSLL GIFTRPIGSL SLFWPVNAIL LGLLLRKPAY ASPAGWLAIY IGMIAADLAN GESLSLAMWL NACNMSLIAT GYGVMSLLPK SQRRMGKPQT TLYMFTASLS SAAVASTLSI LRNDSLYNNT AVIAWLAWFS EQFSTNLLLL PVLLAAPRLK QLLRMQINWQ LRASMPLLAL LFSLVFSVYI GGPGAIAFPI PALLWCAVRY QLFTVTLLTL LTGMTEISSI SANLMLYETP NNHIAFLDTL MSARLGIAML VMGPLILASS IAVNRKLLRR LEHSANHDFL TGVLARNALT RKAGELLEHK HKSKEAVSLL LIDIDHFKQI NDTHGHLVGD QVLASFAHIV RRELRHDQLF GRLGGEEFAI MLPRALAAQG VALAEHLRQL VQKADLLPTG KVPLNITISV GVASLGMNEV KSLEQLMNMA DIALYRAKSQ GRNRVESFNA VSGNSVGHIM FK
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