Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0977 |
Symbol | |
ID | 5605400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1078899 |
End bp | 1081022 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640936496 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001477209 |
Protein GI | 157369220 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.138127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC ATTCAGCGGC TCAAAGGCAT AAAATCGTAG GAAACAAGGA AAAAGCAGGC TTACAGGTCA TCGGGGCATT TTCCTCACTC TTTCTGGGTC TTTGCTCTCT GTCTGTCGGC AGCGTTAACG CCGCCGCCGT GGACGAGAAG GTTCAGGAAA CCGCAGACAG CAAACGTAAC GACAACTGGC AGGACTCCGA GAGCCTGCTG GTCACCGGCG AAAAAATCAA ACGCAGCATT TTTGATACCG GCTCCAGCGT GCAAGTGTTC GACAGCGAAC GCATTGCCTC TATGCCCAAT GCGTTGCAGG TCCCTGATTT ACTGAGGATG ACTGCCAACG TCATGGATGT GGGCATCGGT AACGACCTTC CGACCGTGCG CGGTATCGAT GGCTCCGGCC CGAATACCGG TGCCAATGCC TTCCTCAGCG GCACCCGCCC ACGTCTCAAT CTGTCATTGG ATGGGCGTTC ATTAACCTAT AACGAGCAGG CCTACGGCCC GCAGTCGCTG TGGGATCTGG ATCGCGTAGA AGTCTTCCTC GGGCCGCAGA GCTATATTCA GGGGCGCAAC GCCATTGCCG GCGCCATCGT GATGGCCAGT AAGGATCCGA CCTTTGACTG GGAAAGCGCC TTCAAGGGGG GCGCGGGAAA CCAGCATTCT TCACAACTGT CCGCCATGGT CTCCGGCCCG CTGGTGGAAG ACCAACTGGC GTTCCGCGTC AGCGTCGATC GTCAGCGCCG CCGTAGTGAC GTCGACCTGC CCGCCTATGA ACCGGTGGGC GATCCGCGCG AGGTTGAAGC CACTACCGCC CGTGCCAAAC TGTTGTTCAA CCCGGCAGGC ATGCGCGAGT TGACCACCAA GCTGACCTTT AACCATTTTG GCAGCACCTC ACCGCAAAAC GAGAGCCTCA ACCCGTTGGT TCACCCGACC AGCCTGCGTC ACGATCCGCG CCGTGCGGTA TTTAAAAGCA ACACCAACAG CGGCGTCTGG GATCTGGCCT GGGAGCAATC CGACAGCCTG ACGCTGGAAA ACCGGGTGAT CTACACCGAC TTCAATATCA ACCGTCCTAC CGCTTATGCC TTGCCGTACG CCGATATCGG CGGCAAAGAG GTGCATGTGG AGCCGGTGGC GCGCTTTGGC GGGCCAGGCA GCCGCCTGCA CGGGCTGGCG GGGTTGCGTT ACTTCCACGC CAAGCAGGAT GAGTTCGTTA ACATTTTCGG TGGTTCCACC TTCAAGGATA AAACCGACAC CAATTCGGTG TTTGCCGAAC TGACCTATGC CATCACGCCA CAGGTGGACC TTACCGCCGC CAGCCGCCTG GAGCGAGAGC ACCGTCAGCG TACCGGCGGC AGCAAGGCCG TACGTATAGA CTTCGACGAA ACCTACGACG TGTTCCTGCC GAAGCTGGAT CTGGCCTGGA AACCGACGGA TACCCAGACC TACGGCGCCA AGGTGGCGCG TGGTTATAAC GCCGGTGGCG CGGGCATCAC TATCGGCACG CCGGTGGTCA ACTACACCTA CGGTTCCGAG TATGTCTGGA ACTATGAGCT CTACACTCGT CACCACCTGA AAGACGCCAA CGTCATTCTG ACCAGCAATA TTTTCTACAA CGACTACAAA GACATGCAGT TGCCGTACTC CCTGGGGCCA AACTCATCGG TGATCCGCAA TGCCGACAAG GTGGAAACCT ACGGTGCGGA GATGGGGGCG ACCTGGCAGC CGCGCTGGGA CTTCGAGCTG TTCACTAACG TTGGCCTGTT GAAGACCAAA ATCAAGAAGT TCTCGGGCAG CGGCGTCGAT GGGCACGAAC TGGCGCGTGC GCCGGCTTAT ACCGCCAACA TGGGCGCCAA GTACCAACTG ATGGCCGGGT TGGAACTGAG CGGCAACGTG GCGTTCTCGG ACTCCTACTA CTCGCAGTAC GACAACGACT CACGCGGGCG CATCGGTTCT TACTGGTCGG CGAATACCCA ACTGGCGTAC ACCTTCGCCT ATGGGCGCGC CACCCTGTAT GCACAGAACC TGTTTGACTC TGAGCGTCGC GTGATGGTCA GCGGCAACGA CGTGTACACG GCGACTCAAC AGCGCCCGCG CATGATTGGC GCGGCACTTG AACTGACATT CTGA
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Protein sequence | MSKHSAAQRH KIVGNKEKAG LQVIGAFSSL FLGLCSLSVG SVNAAAVDEK VQETADSKRN DNWQDSESLL VTGEKIKRSI FDTGSSVQVF DSERIASMPN ALQVPDLLRM TANVMDVGIG NDLPTVRGID GSGPNTGANA FLSGTRPRLN LSLDGRSLTY NEQAYGPQSL WDLDRVEVFL GPQSYIQGRN AIAGAIVMAS KDPTFDWESA FKGGAGNQHS SQLSAMVSGP LVEDQLAFRV SVDRQRRRSD VDLPAYEPVG DPREVEATTA RAKLLFNPAG MRELTTKLTF NHFGSTSPQN ESLNPLVHPT SLRHDPRRAV FKSNTNSGVW DLAWEQSDSL TLENRVIYTD FNINRPTAYA LPYADIGGKE VHVEPVARFG GPGSRLHGLA GLRYFHAKQD EFVNIFGGST FKDKTDTNSV FAELTYAITP QVDLTAASRL EREHRQRTGG SKAVRIDFDE TYDVFLPKLD LAWKPTDTQT YGAKVARGYN AGGAGITIGT PVVNYTYGSE YVWNYELYTR HHLKDANVIL TSNIFYNDYK DMQLPYSLGP NSSVIRNADK VETYGAEMGA TWQPRWDFEL FTNVGLLKTK IKKFSGSGVD GHELARAPAY TANMGAKYQL MAGLELSGNV AFSDSYYSQY DNDSRGRIGS YWSANTQLAY TFAYGRATLY AQNLFDSERR VMVSGNDVYT ATQQRPRMIG AALELTF
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