| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0923 |
|---|
| Symbol | |
|---|
| ID | 5603075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1024689 |
|---|
| End bp | 1025912 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640936444 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001477157 |
|---|
| Protein GI | 157369168 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.462621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTT CTTCTCCCCC TAAATCACCG ACAATTGGGA ATACGTCTCC TTCCAACTGG
CCACTGGCGC TTTGTGCCGG GTTGTTGGGC ATCGGGCAAA ACGGCCTGCT GGTGGCATTG
CCGGTATTGG TCAGCATGAC TCATCTTTCG CTTTCCGTCT GGGCCGGGTT ACTCACGCTC
GGCTCAATGC TGTTTCTGGT CGGCTCGCCG TGGTGGGGCA AGCAGTCCGA AGTTCGCGGC
TGCAAGTTTG TGGTCACCAT GGCGTTAGCA GGGTATTTGT TCAGTTTTGC CTTGCTGGCA
CTGGCGGTTT GGGGGCTGGC GGCAGGCTGG CTTTCGCCGA TGACGGGATT GGGCGCGCTG
ATCGTGGCAC GGATTATCTA TGGTTTGACG GTGTCCGGCA TGGTGCCTGC CAGTCAGACC
TGGGCCCTGC AGCGGGCCGG TTATGAGCAA CGTATGTCGG CGCTGGCGAC CATCAGCTCC
GGGCTGAGCT GCGGGCGGCT GCTTGGCCCC CTGTGCGCCT CGTTGGCGTT GTCGATTCAT
CCGATGGCAC CGCTGTGGCT GATGGCGCTT GCGCCATTAA TCGCCCTGCT GGTGATATGC
CGTCAGCATA ACGATCCGCC TTTGCCACCG GTGGCCCATC AGCAAAACCG ACTGCGCCTC
AATATGGTGC CTTATTTGTT GTGTGCGGTG CTGTTGGCGG CTTCGGTCAG CCTGATGCAA
CTCGGGTTGG CACCGCATTT GAGCCGTTTA TTCAGCCACT CTGCCACCAG CGTTAGCCAT
CATGTGGCGG TGCTGTTGAG CGTAGCGGCG GGTTGTACCC TGTTGGCACA GTTTCTGGTG
GTGCGCCCAC AGCGCTTTAG CGCGTCACAA CTGCTGCTGC TTGCTGCGGT ATTGATGGTG
GTCGGATTGG GCCTGATGTG CGCTGAGCCG CTGGCGTTGT TCTATGCCGG TTGTGCGCTG
GCCTCCTTTG GCGCGGCTAT GGCGACACCG GGCTACCAGC TATTGTTGAA TGATAAATTG
TCCACCGGCA AAGGGTCGGG AGTCATCGCC ACCAGCCACA CGCTGGGTTA CGGTCTGAGC
GCGCTGATGG TGCCGGTGGT GGCCAGGTTT TATGGTGAGT CGCAGCTGAT TGCGGCGGCT
CTGACGATGG CGGTCCTGTT GGGCGGTATC AGCGGCTGGC TGTGGTGCCA GCACCGTGTC
AGGGTAAATT CTGCGGGAGA GTAA
|
|---|
| Protein sequence | MHISSPPKSP TIGNTSPSNW PLALCAGLLG IGQNGLLVAL PVLVSMTHLS LSVWAGLLTL
GSMLFLVGSP WWGKQSEVRG CKFVVTMALA GYLFSFALLA LAVWGLAAGW LSPMTGLGAL
IVARIIYGLT VSGMVPASQT WALQRAGYEQ RMSALATISS GLSCGRLLGP LCASLALSIH
PMAPLWLMAL APLIALLVIC RQHNDPPLPP VAHQQNRLRL NMVPYLLCAV LLAASVSLMQ
LGLAPHLSRL FSHSATSVSH HVAVLLSVAA GCTLLAQFLV VRPQRFSASQ LLLLAAVLMV
VGLGLMCAEP LALFYAGCAL ASFGAAMATP GYQLLLNDKL STGKGSGVIA TSHTLGYGLS
ALMVPVVARF YGESQLIAAA LTMAVLLGGI SGWLWCQHRV RVNSAGE
|
|---|
| |