Gene Spro_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0707 
Symbol 
ID5605284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp780048 
End bp780950 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content56% 
IMG OID640936218 
Productdihydrodipicolinate synthetase 
Protein accessionYP_001476941 
Protein GI157368952 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTT ATCAAGCCGC AGATATTTGC GGCGTCAATC CTATTGTCGC TATGCCGTTT 
AGGGCTGACG GCGAGATAGA TGAAGCAAGC TTTGTGCGAT TGCTGGAGCA TTTAGCCGCC
ACCGGCGTTC AGGGAACGAC GCTGTTTGGC ATCGCCAGTG AGTTCCCTAA ACTGGACGAC
CGCGAACGCG CTCGGCTGGC GGAAATATTT ATCGCCACGC TGGCGGGTGC CCCACTGTAC
CGCGCTATCT CAGTCACCGA TCACAGCAGC GAAGTCGCCG TTAAACGCGC TCGTCATTAT
CAAAAACTGG GGGCGGATGC GTTGATGCTG CTGCCGCCAT TTTTCCTGCA GCCCAGTCCG
CAGGCGATCC AACAGCACAT TTTTGCCGTA CTGGATGCCG TAGATATTCC GGTGATGGTG
CAATACGCGC CGGGCGAAAC CGGGTCGCCG ATCACGCCTC AACAATTGGC TGACGTGGCG
GCGCGCTATC CCCATGCGGT GTTCAAGATA GAGTGCAATC CACCGGTGGA TTACACCAAA
GAATTTCTGC AACTGGCCCC GCAGGCCAGT GTGTTAAATG GCTATGCCGG GCTTTATATG
TTGCCAATGC TGGCAGCGGG CGGCAAAGGC GTGATGCCTG GCTGTTCGTT CAGTGAGGTT
TATCTGCGGA TTTATCGCCA CTGGCAAGCC GGAGAGACTG AACAGGCGCA AAGGCTGCAT
CAGGCACTCT TGCCTTACAT TCAGCGCTGG ATGAGCCACT GCGAATACAT TATTCAGGTT
GAGAAGACGA TTCTGCAGCG GCGCAATATC ATTGCCACCG ATTACTGCCG TCACCCCGGC
TGGCAACTCA CCGCAGACGA TCACCTGATG ATCGACCGGT TTTTAGGCCA GTTTTCTCTT
TAG
 
Protein sequence
MSRYQAADIC GVNPIVAMPF RADGEIDEAS FVRLLEHLAA TGVQGTTLFG IASEFPKLDD 
RERARLAEIF IATLAGAPLY RAISVTDHSS EVAVKRARHY QKLGADALML LPPFFLQPSP
QAIQQHIFAV LDAVDIPVMV QYAPGETGSP ITPQQLADVA ARYPHAVFKI ECNPPVDYTK
EFLQLAPQAS VLNGYAGLYM LPMLAAGGKG VMPGCSFSEV YLRIYRHWQA GETEQAQRLH
QALLPYIQRW MSHCEYIIQV EKTILQRRNI IATDYCRHPG WQLTADDHLM IDRFLGQFSL