Gene Spro_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0682 
Symbol 
ID5605617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp749763 
End bp750449 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content57% 
IMG OID640936193 
Productputative RNA methyltransferase 
Protein accessionYP_001476916 
Protein GI157368927 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000176803 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.146747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTC ATATTGTTTT AGTGGCTCCG GCGCGGCCGG AAAACGTCGG CGCTGCGGCG 
CGGGCAATGA AAACCATGGG TTTCACTTCG TTGCGCATTG TCGACAGCGA AGCGCACCTG
CAACCGGCGG CTCGCTGGGT GGCTCATGGG GCGGGGGATA TCCTCGACGG CGTGCAGACT
TTCGCCACTC TCGAGCAGGC GCTGGCGGAC GTGGATTTCA CCGTTGCTAC CACTGCCCGC
AGCCGCGCGC GTTTCCATTA TTACTGTACG CCGCAGCAAC TGTTGGGTCA GTTGAGTGAA
CGCAGTCAGT GGGTGGGGCA GGCAGCGTTG GTGTTTGGCC GTGAAGATTC CGGCCTGACC
AATGAAGAGT TGGAGTTGGC AGATTTGCTG ACCGGTGTGC CGATGCAGGC AGATTACCCT
TCGTTGAATC TCGGCCAGGC GGTGATGGTG TATTGCTATC AATTGTCGGA ACTGATGAAG
GTTAGCGCAC CGCAGGAACC AGTGGCTAAT GAGGGCCAGC TTAAAGCACT GCGTCAGCGT
GCCGATGGTT TGCTGGGGGC ATTGGGGGTG GGTGACGATC AAAAATTGCG CGATTGGCTG
CACCAGCGGC TTGGTACCTT GCAGCAGCGC GATACGGCAA TGTTGCATAC TTTGCTGCAT
GACATCGAAA AAAAACTGAC AAAGTGA
 
Protein sequence
MQLHIVLVAP ARPENVGAAA RAMKTMGFTS LRIVDSEAHL QPAARWVAHG AGDILDGVQT 
FATLEQALAD VDFTVATTAR SRARFHYYCT PQQLLGQLSE RSQWVGQAAL VFGREDSGLT
NEELELADLL TGVPMQADYP SLNLGQAVMV YCYQLSELMK VSAPQEPVAN EGQLKALRQR
ADGLLGALGV GDDQKLRDWL HQRLGTLQQR DTAMLHTLLH DIEKKLTK