Gene Spro_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0617 
Symbol 
ID5606177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp683089 
End bp684261 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID640936125 
Productmajor facilitator transporter 
Protein accessionYP_001476851 
Protein GI157368862 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTG ATTCTGTTTC CGTACCCGCA GCCGGGGCGG CTCTCCCCTG CCCGCCGCGG 
CTGTTGACCG CCATTATTAT CTTTGCCGCC ATCGCGCCGG GCATTCTGAT GACCGCACCG
GCGGTAGCGG CACAACTGGC CAGCCAGTGG CAGCTGACCC CGGCGCAAGT CGGCCACCTG
TTTTCGACCG AACTGGGGGC GATGAGCCTA GCCACGCTAC CCGCCTGGTG GTGGATTGGC
CGCGTTAACT GGCGTCGGGT GGCAGCGCTG GCGGCAGGGG TGTTTATCGC CGGTAACCTG
GCCTCGGCGT GGGTCAACGA TTTCGGCCTG CTGCTGGGGT TGCGCTTTGT CGCTTCGCTG
GCGGGCGGCA CCCTGATGAT CCTGTGCATC ACCTGCGCCG CCGGCACCGC CAACCCCAGC
CGGGTCTATG CCCTGTGGGT GCTGGGCCAA CTGGTGCTGG GGACGATCGG GCTGCTGGTG
CTGCCGCCGT TGTTTGCCCA TTTTGGCCTG ATGGCGGTCT ATCTGATCCT GGCAGCCATC
ATGCTGTGCT GCCTGCCTCT GATCGCTGCC TTCCCCAGCG GGTTTCACCC GGTGTACTCC
GCCGTCCATC GCGCCGCAAT CCCCTGGTTT CGTAAACTCT TCGCCGTGCT GGCGGTACTG
ACTTTTTACA TCAGCCTGAG CGCGGTCTGG ACCTTTATCG GCAGCATCGC CGCCGCTGCT
GGTCTTTCGC CGGTCAATAG CGGACAGATA CTGGCCGCGG CCACGCTGTT CGGCATCGCC
GGTGCCGGGG GTGCGGCGTT AATCCGAGGG CGGCACGCGG GTAATCGACT GATTTGGCTG
AGCTATGGCT TGTTAATCGC CGGTATCGCG CTGCTGACTC GTGAGCCACT GCTGTTGCGC
TTTGCGGTGG CCGCCGTGTT GTTCAAGTTC ACCTGGACCT TTGTACTGCC GTTTATTCTG
GCCCGCGTCG CCGGGCTGGA TAACAACGGC AAGTTGATGA ACAACATCAA TCTGGTGATT
GGCGGTGGCA TGGCGATTGG CCCGACGCTG GCCGGTTATC TGATTGAATC TTTCGGTGGT
TTCGACGCAC TGCTGGCCGG GGCGCTGGGC TGCTCGCTGC TGTCGTTGCT GTTGATTTTG
TTGGCTTCAC CGCGCGATCG CCGCGCCGTT TAA
 
Protein sequence
MSSDSVSVPA AGAALPCPPR LLTAIIIFAA IAPGILMTAP AVAAQLASQW QLTPAQVGHL 
FSTELGAMSL ATLPAWWWIG RVNWRRVAAL AAGVFIAGNL ASAWVNDFGL LLGLRFVASL
AGGTLMILCI TCAAGTANPS RVYALWVLGQ LVLGTIGLLV LPPLFAHFGL MAVYLILAAI
MLCCLPLIAA FPSGFHPVYS AVHRAAIPWF RKLFAVLAVL TFYISLSAVW TFIGSIAAAA
GLSPVNSGQI LAAATLFGIA GAGGAALIRG RHAGNRLIWL SYGLLIAGIA LLTREPLLLR
FAVAAVLFKF TWTFVLPFIL ARVAGLDNNG KLMNNINLVI GGGMAIGPTL AGYLIESFGG
FDALLAGALG CSLLSLLLIL LASPRDRRAV