Gene Spro_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0590 
Symbol 
ID5606465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp654825 
End bp655523 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content61% 
IMG OID640936098 
Product3-oxoacid CoA-transferase, A subunit 
Protein accessionYP_001476824 
Protein GI157368835 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGC TCGATAAACG CGTCGCAAGC TACCAGGAAG CGCTGGCAGG CCTGACGGAC 
AATATGACGG TGTTGGCGGG CGGTTTCGGC CTGTGCGGCA TCCCGGAAAA CCTGATTAAT
GAGATCCGTC GCCTGGGAGT GACCGGCCTG ACGGTGGTAT CAAACAACTG CGGCGTCGAC
GGCTTTGGCC TCGGTCTGCT GCTGGAAAAC CGGCAGATCC GCAAGGTGGT GGCCTCCTAC
GTTGGTGAGA ACGCGCTGTT CGAGCAGCAG GCGATCAGCG GTGAACTGGA AGTGGAACTG
ACGCCGCAGG GTTCTCTGGC AGAAAAAATC CGTGCCGGAG GCGCCGGTAT CCCGGCGTTC
TTCACCGCTA CTGGCTACGG CACCCCGGTG GCCGAAGGCA AGGAGGTACG CGAGTTCAAC
GGGCGCCCTT ACATCATGGA GCAGGCGATC ACCGGTGACT TCGCCATCAT CAAGGGCTGG
AAAGCCGATC ACTTCGGCAA TGTCATCTAT CGCCACACCG CACAGAACTT TAACCCGCTG
ATGGCCACCG CCGGGCGAAT CACCGTGGTG GAGGTGGAAG AGATCGTCGC ACCGGGCGAA
CTGGATCCGG CCGCGATCCA CACCCCCGGC ATCTACGTTG ACCGCCTGAT CCAGGGCAGT
TTCGAAAAGC GCATTGAACA GCGCACTCTG CGTACCTGA
 
Protein sequence
MAGLDKRVAS YQEALAGLTD NMTVLAGGFG LCGIPENLIN EIRRLGVTGL TVVSNNCGVD 
GFGLGLLLEN RQIRKVVASY VGENALFEQQ AISGELEVEL TPQGSLAEKI RAGGAGIPAF
FTATGYGTPV AEGKEVREFN GRPYIMEQAI TGDFAIIKGW KADHFGNVIY RHTAQNFNPL
MATAGRITVV EVEEIVAPGE LDPAAIHTPG IYVDRLIQGS FEKRIEQRTL RT