Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0578 |
Symbol | |
ID | 5606574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 642567 |
End bp | 643334 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640936086 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001476812 |
Protein GI | 157368823 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATGGC TCAGCGCACA GGACGAATTT GATCCCGATG CTATCAACAA TAGCGTGTTA GGCATTGCGG CCGAGCTGGC GCAACATGAT TCCGGGCCGC ACTGGCACAA CATGGGGCAG TTGCTGTTCA GCCAACGGGG CTGTATGCGC ATCACGCTCA ATGAAAGCAT TTGCCTCCTG CCGCCGGCGC GCATTGCCTG GATCCCACCG TTGGTGGTGC ACCGTGTTCA GGTTACCGGC GTGGCGGGTT ATCGCTCGGT TTATCTCGAC AACCACCGCT ACCCCGGCCT TTCGCCCCAT CTGGAAGTGC TGTCGGCCTC TTCTTTGCTG CGGGAAGTGC TGGAGCGGAT CGCCCTCGCC GACTTTACCA CCCAGTGGGA AAGCGGCCCC AGCGCCAATA TTCTTGCCGT ATGCCTGGAC GAAATACGGC ATGCACAGCG CGAACTGACC TTATTGCCGC TGCCCAAGGA CCGCCGCTTA CGGCAACTGG CCGGCATGGA GGAAGTACCG CCGCTCAATG AGCTGGCGCG CTACAGCGGC GCTTCGGAGA AAACCATCAG CCGTATCTTT CGCAAGGAGA CCGGATTGAG CTACCAGCAG TGGCGCCAGC AATGGCGTTT GATCAAAGCC ATTGAGCTGC TGGCGGAGGG ATACGGCCTG TCAGATATCG CCGGTAAGCT TGAATTCTCC AGCGACAGCG CCTTCTCAAC CTTCTTTAAA AATATGACCG GCAGTTCGCC GCGCGCCTAT ATGCTGATCC GCCGTTAA
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Protein sequence | MAWLSAQDEF DPDAINNSVL GIAAELAQHD SGPHWHNMGQ LLFSQRGCMR ITLNESICLL PPARIAWIPP LVVHRVQVTG VAGYRSVYLD NHRYPGLSPH LEVLSASSLL REVLERIALA DFTTQWESGP SANILAVCLD EIRHAQRELT LLPLPKDRRL RQLAGMEEVP PLNELARYSG ASEKTISRIF RKETGLSYQQ WRQQWRLIKA IELLAEGYGL SDIAGKLEFS SDSAFSTFFK NMTGSSPRAY MLIRR
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