Gene Spro_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0578 
Symbol 
ID5606574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp642567 
End bp643334 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content59% 
IMG OID640936086 
ProductAraC family transcriptional regulator 
Protein accessionYP_001476812 
Protein GI157368823 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGGC TCAGCGCACA GGACGAATTT GATCCCGATG CTATCAACAA TAGCGTGTTA 
GGCATTGCGG CCGAGCTGGC GCAACATGAT TCCGGGCCGC ACTGGCACAA CATGGGGCAG
TTGCTGTTCA GCCAACGGGG CTGTATGCGC ATCACGCTCA ATGAAAGCAT TTGCCTCCTG
CCGCCGGCGC GCATTGCCTG GATCCCACCG TTGGTGGTGC ACCGTGTTCA GGTTACCGGC
GTGGCGGGTT ATCGCTCGGT TTATCTCGAC AACCACCGCT ACCCCGGCCT TTCGCCCCAT
CTGGAAGTGC TGTCGGCCTC TTCTTTGCTG CGGGAAGTGC TGGAGCGGAT CGCCCTCGCC
GACTTTACCA CCCAGTGGGA AAGCGGCCCC AGCGCCAATA TTCTTGCCGT ATGCCTGGAC
GAAATACGGC ATGCACAGCG CGAACTGACC TTATTGCCGC TGCCCAAGGA CCGCCGCTTA
CGGCAACTGG CCGGCATGGA GGAAGTACCG CCGCTCAATG AGCTGGCGCG CTACAGCGGC
GCTTCGGAGA AAACCATCAG CCGTATCTTT CGCAAGGAGA CCGGATTGAG CTACCAGCAG
TGGCGCCAGC AATGGCGTTT GATCAAAGCC ATTGAGCTGC TGGCGGAGGG ATACGGCCTG
TCAGATATCG CCGGTAAGCT TGAATTCTCC AGCGACAGCG CCTTCTCAAC CTTCTTTAAA
AATATGACCG GCAGTTCGCC GCGCGCCTAT ATGCTGATCC GCCGTTAA
 
Protein sequence
MAWLSAQDEF DPDAINNSVL GIAAELAQHD SGPHWHNMGQ LLFSQRGCMR ITLNESICLL 
PPARIAWIPP LVVHRVQVTG VAGYRSVYLD NHRYPGLSPH LEVLSASSLL REVLERIALA
DFTTQWESGP SANILAVCLD EIRHAQRELT LLPLPKDRRL RQLAGMEEVP PLNELARYSG
ASEKTISRIF RKETGLSYQQ WRQQWRLIKA IELLAEGYGL SDIAGKLEFS SDSAFSTFFK
NMTGSSPRAY MLIRR