Gene Spro_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0538 
Symbol 
ID5606852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp595492 
End bp596286 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID640936047 
Producttransglutaminase domain-containing protein 
Protein accessionYP_001476774 
Protein GI157368785 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA ACATTGAGCA CAATACCCAT TATACCTACG CCCAGCAGGT GCAGCGCAGC 
ACCCAGTATC TGCGCCTGAC GCCACAGAAT TCCCGGCACC AGCGCGTTAT CTCCTGGCAA
CTGACGCTGC CGGAAGATGC GGTGTGCACC ACCGATGCTT TCGGTAACGT ACTGCACGTG
CTGACGCTGG ATCACCCGCA TCAGGCGATC ACCATTCAGG CCCACGGCGT GGTGGAGATT
GAAGACGGCG TGGAAGATCA GGTGATGGGG CATCTGTCAC CGCTGGTATT CCTGCGCCAC
AGCCCCTTGA CCCAGCCCGA CAGTGCGATC CAGGCCTTTG CCCTGCGCTA TTACCAACCG
CAAGCGGTGC TTGCCGGGCT GGAAAACCTG ATGGGCGAAC TGCTGCTGAA AATGCCTTAC
AGCCCAGGTT CCACCAGCGT CACCGACAGC GCGGCCCAGG CGTTCGCCAC CGGTACCGGC
GTCTGTCAGG ATCACACCCA CGTATTTCTG GCCTGCTGCC GTAGCCTGAA TATTCCGGCG
CGCTATGTCA GCGGTTATCT TTACAGCGAA GACTCGACGC ACGTCGCCAC CCACGCCTGG
GCGGAAGCCT GGGTCGACGA ACGCTGGCAC AGTTTTGACG TTACCAACAA CACCCGTCTG
CCGAATCAGC ACCTTAAGCT GGCGGTAGGC ATCGACTATC TGGACGCCTG CCCGGTGCGC
GGCATGCGGC TGGGCGGCGG CTGCGAGAAT ATGCAGACCA TCGCCGAAGT GCAGATGATG
CCCAGCGGGC AATAG
 
Protein sequence
MKLNIEHNTH YTYAQQVQRS TQYLRLTPQN SRHQRVISWQ LTLPEDAVCT TDAFGNVLHV 
LTLDHPHQAI TIQAHGVVEI EDGVEDQVMG HLSPLVFLRH SPLTQPDSAI QAFALRYYQP
QAVLAGLENL MGELLLKMPY SPGSTSVTDS AAQAFATGTG VCQDHTHVFL ACCRSLNIPA
RYVSGYLYSE DSTHVATHAW AEAWVDERWH SFDVTNNTRL PNQHLKLAVG IDYLDACPVR
GMRLGGGCEN MQTIAEVQMM PSGQ