| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0459 |
|---|
| Symbol | |
|---|
| ID | 5603413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 507797 |
|---|
| End bp | 509533 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640935966 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_001476695 |
|---|
| Protein GI | 157368706 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0729] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.679233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.136878 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCACGAT ACCGTGCCCT GTGCTTTGTG TGTGCGCTGC TCGCCACGCC TGCGGCCTAT
TCGGCGAATG TGCGGCTGCA GGTTGAAGGA CTTAGTGGGG AATTGGAAAA AAACGTCCGG
GTGCGTTTGT CGTCTATCAC GCCGGAGGAG GTCAGTACGG ATGGCCGTTT TCGCGCACGT
GTGGACGAAG CCGTCCGTCA GGGGCTGAGA GCACTTGGCT ATTATCAGCC CACCATCGAC
TTTACGCTGG ATGACCGGCC AGGGCTGGCT CGTCCGGTGC TGCACGCCAA GGTTAATCCG
GGCGAGCCGG TGCGGATTGC CGGCGCCAAT ATCGTGCTGG AAGGCGGCGC GAAAACCGAT
GACGACTATC TGGCGTTAGT CAAAAAAGGC AAGCCGACGA TAGGCGAGAT CCTCAATCAC
GGCAAATACG ACAGTTTTAA AGGTTCGCTG ACCGGCCTGG CACTGCGTAA AGGCTATTTC
GATGCCGATT TGACCAAGAG CCAGCTCGGC GTGGCCGAAG AGCTGCACAA GGCCTATTGG
GACATCGACT TCAACAGCGG GCAGCGTTAT CGCTTTGGCC AGGTGAAGTT TACCGGCTCG
CAAATTCGTG AAGACTATCT GCAAAATCTG GTGCCCTTTC ATCAGGGGGA TTATTACAGT
TCGGAAGATC TGGCCGAACT GAACCGCCGT TTATCCGCCA CTAACTGGTT TAACTCGGTG
GTGGTGTCCC CTGATTTCAA AGATGCCAAA GAGAACAAGA TTTTGCCGTT AGATGCGTTG
GTATCACCGC GCACGCGTAA CACCATCGAA ACCGGGGTCG GTTATTCCAC CGACGTCGGT
CCCCGGATCA AAGGCACCTG GAAAAAACCC TGGCTTAACG ACCGAGGTCA CAGCCTGGAA
ACCAGCGCCA GCGTTTCGGC CCCGGAACAG CAGCTCGATT TGACCTATAA AATCCCGTTA
TTGAAGAATC CACTGGAGCA GTACTACCTG CTGCAGGGCG GTTTCAAGAA CGTCGATCTC
AACGATACCA AGTCCGTCAC TTCAAAAGCG GTGGTTTCCC GCAACTGGGA TCTTTCCAGC
GGCTGGCAGC GAGCATTGAA CCTGACCTGG CGTCTTGACC ACTTTACTCA GGGTAACGTC
ACCAACACCA CCATGCTGCT GTATCCCGGC GTTAGCGTTA ACCGCACCCG TTCGCGCGGC
GGCCTGATGC CCACCTGGGG GGACAGCCAG CGTTATTCTA TTGATGTGTC CGACAGCACC
TGGGGATCAG ACGTGGACTT CGCGCTGATG CAGGCGCAGA ACGTCTGGAT CCGCACCCTG
GCCGACAAGC ACCGTTTTGT CGCGCGTGGG CAGGTGGGCT GGATTGAAAC CAACGACTTT
GAGAGAGTGC CGCCAGACCT GCGATTCTTC GCCGGTGGCG ATCGCAGCAT TCGTGGTTAC
AAGTACAAGG GCATTTCACC CCGCGACGAC GACGGTAAGC TGACCGGTGC ATCCAAAATG
CTGACCGGCT CGCTGGAGTA TCAATACAAC GTGACCGGCA AATGGTGGGG CGCGGTGTTT
GTCGATTCAG GCGAAGCGGT GAACGATATC AAGCAGAGCG ACTTTAAGAC CGGTGCCGGC
TTCGGCGTGC GCTGGCAGTC ACCGGTTGGC CCGGTGAAGC TGGATATCGC CGCCCCGGTT
GGGGATAAGG ACACCCACGG GGTGCAGTTC TATATTGGTT TGGGGCCTGA ACTATGA
|
|---|
| Protein sequence | MPRYRALCFV CALLATPAAY SANVRLQVEG LSGELEKNVR VRLSSITPEE VSTDGRFRAR
VDEAVRQGLR ALGYYQPTID FTLDDRPGLA RPVLHAKVNP GEPVRIAGAN IVLEGGAKTD
DDYLALVKKG KPTIGEILNH GKYDSFKGSL TGLALRKGYF DADLTKSQLG VAEELHKAYW
DIDFNSGQRY RFGQVKFTGS QIREDYLQNL VPFHQGDYYS SEDLAELNRR LSATNWFNSV
VVSPDFKDAK ENKILPLDAL VSPRTRNTIE TGVGYSTDVG PRIKGTWKKP WLNDRGHSLE
TSASVSAPEQ QLDLTYKIPL LKNPLEQYYL LQGGFKNVDL NDTKSVTSKA VVSRNWDLSS
GWQRALNLTW RLDHFTQGNV TNTTMLLYPG VSVNRTRSRG GLMPTWGDSQ RYSIDVSDST
WGSDVDFALM QAQNVWIRTL ADKHRFVARG QVGWIETNDF ERVPPDLRFF AGGDRSIRGY
KYKGISPRDD DGKLTGASKM LTGSLEYQYN VTGKWWGAVF VDSGEAVNDI KQSDFKTGAG
FGVRWQSPVG PVKLDIAAPV GDKDTHGVQF YIGLGPEL
|
|---|
| |