Gene Spro_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0340 
Symbol 
ID5604229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp390902 
End bp391936 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content54% 
IMG OID640935845 
Productornithine cyclodeaminase/mu-crystallin 
Protein accessionYP_001476578 
Protein GI157368589 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.826722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG GACAGGTAGA TTTTGAGGTC ATCACAGGCG ATTATATCAA CAAGGTCATT 
GCCACGTCCC GCCGGGACAT TATCGATCTG GTTCGCCAAA GTTACCTGAC CCATCATCAG
GGAAAAACCG AGAATCCAGA CAGCTATTTT TTGCGTTTTA AAAACAAACC GGAAGCCAGA
ATCATTGCTC TGCCAGCGGC CATCGACAAC CCCGAGGCTG ACACTTCCGT TTCCGGCATC
AAATGGATCG CCAGCTATCC GCGCAATATC GAAGCCAACC TGCAGCGCGC ATCGGCGGTT
ATTTTGTTGA ACGATTATGA GACGGGATAT CCGTTCTCAT GCCTGGAGGC ATCGCAAATC
AGCGCGGCGC GTACTGCCGC TTCTGCGGTA CTGGCGGCCA ATCACCTTGG GCCAGCCGGC
AAAAACGCCA AGCGTTTGTC CATCATCGGC GGCGGTCTGA TCGCCAGAAC CATTCTGGCC
TTTTTCAAGG ATGAGGGGTG GCGTTTCGAT GACGTTGTGA TCCATGACAT TTCTGCCGAA
TATCGCGATG CATTTATCAA AAACACCAAC CTGCAAGAGG TGTATCAGGT GCGGGCGGCG
GTCGATCAAG CGGAAGCGCT GGCCGCGGAC ATTGTCGTTT TCGCCACCAC GGCGGCGTCG
CCGCATGTCA TGGATGAGCG GACCTTCGCG CCTCATCAAT TGGTGCTCAA TATTTCCTTG
CGCGATGTGT CTCCGGAGAT CGTTCACGCT GGCAACAACG TGCTGGACGA TGTTGAACAT
TGCATGAAGG CCAACACCTC ACCTCACCTT GCCGAGCAAA AATATGGCCA CCGCTGCTTT
ATCAACGGCA CCCTGGCGCA AGTCATCAAC GGTGAGATAA CGCTCGATAA AACCAAAGCC
ACTCTCTTTT CTCCCTTTGG TCTGGGCGTG CTCGATCTGA GCTTGGCCAT GTTTATTTAC
CGCTGTAATC GCGTAGCACC CGGCAGGCAT ATCATCCCCG ATTTCTTCCC CGACACGCAG
CGCTGGAGCC TTTAA
 
Protein sequence
MSDGQVDFEV ITGDYINKVI ATSRRDIIDL VRQSYLTHHQ GKTENPDSYF LRFKNKPEAR 
IIALPAAIDN PEADTSVSGI KWIASYPRNI EANLQRASAV ILLNDYETGY PFSCLEASQI
SAARTAASAV LAANHLGPAG KNAKRLSIIG GGLIARTILA FFKDEGWRFD DVVIHDISAE
YRDAFIKNTN LQEVYQVRAA VDQAEALAAD IVVFATTAAS PHVMDERTFA PHQLVLNISL
RDVSPEIVHA GNNVLDDVEH CMKANTSPHL AEQKYGHRCF INGTLAQVIN GEITLDKTKA
TLFSPFGLGV LDLSLAMFIY RCNRVAPGRH IIPDFFPDTQ RWSL