Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0262 |
Symbol | |
ID | 5606614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 292821 |
End bp | 294017 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640935753 |
Product | major facilitator transporter |
Protein accession | YP_001476500 |
Protein GI | 157368511 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0989253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0321857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAG CGGTATGTGT AAAACACAGT GGTTTCTGGA GTATTCCCGC CAGAACCATG ACGCTGGCTT GTCTGCTGGT GTTTATGGCG CAGATGGCGA CGACGGTGTA TTTGCCTTCA TTACCGACGG TGATGCAGGA ACTGGCAATG ACGCGCCGCG CCACCGAGCT TTCTATATCG ATATTCGTGA TAGGAGCCGC CTTGCCGGTG TTGTTCTGGG GGGCTGCGGC CGATCGTTTT GGCCGTCGCC TGCCGCTGAC ATTGTCTCTG GCGTTGTTTA TCAGTTGCAG TGCTCTGCTG GCATTTTGCA GTAACGGTAC TCAGTTATTA GTGCTGCGGG CACTGCAGGG GGTTGCCGCC GGTGGTGCTG CAATCATCGC GCGCATTATT GTTCGTGATA ACTGGAGTGG TGACGAGCTG GCAAGGCGCC TTTCGGTGCT GTCGATAGCC TTTATCGCCG CGTTGGGCGG TGGGCAGTTT ATCGGTGGGC TGCTCAGTCA GTATTCGCAC TGGCAAATGG GTTTTGTGGT GATGGGGCTG ACCGGGCTGG CGATATGGTT ACTGATGCTG ACGTTGCCAC TGGAAGCGGG CCGCGGAGCA GGCAGGCGGC CGGCCATGGC GGCAACCTAT TGGCACATTC TGCGTCGTCC GGGGTTCTTC TGGCCGGCAG TTGTCGGCGG ATTGGGGTTT GCTACCACCG TCACTCTGCA GGAAGTGAGT CCGTTTATCA TGCAGCAGGG GTTTGGCCTG AACGTTACCG CCTTTGGGGC TCTGGGGCTG GTGATCGGCG TGGCTTACTT TACTGGAGCA ATGACGGTAA ACCGGACGGT TGCGCGCTTT GGCGGTAAGC GGCTGATGCA GGCGGGGACG AGTATCGTCG CCGTTGCCAC TGCTGCGATA ATGGTGCTGT GGTGGAGCGG TGTACTGGTG GGGCTTTCCG GTATGACAGT CTTCATCGCT TTGTATTGTT TGACGATTTT TGGCCAGGCG GTGTTGTTTC CCAATAGCAT GGCGATGGCG GTCAGCGATG TTAAACAGCA GGGCGCCTAC GCCATGGCGT TATGTGGCTT TCTGCAACAG TGTCTGGCAG GCATAGCTGC AGCCGGTGCG GTTCTACTCG AACATCATGG CCTGTGGGCG GCTGCTATCG CGTTGCTTGG TCTGATCGCC TGGTTAATTG TTAAGCTAAG GATGTAA
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Protein sequence | MSKAVCVKHS GFWSIPARTM TLACLLVFMA QMATTVYLPS LPTVMQELAM TRRATELSIS IFVIGAALPV LFWGAAADRF GRRLPLTLSL ALFISCSALL AFCSNGTQLL VLRALQGVAA GGAAIIARII VRDNWSGDEL ARRLSVLSIA FIAALGGGQF IGGLLSQYSH WQMGFVVMGL TGLAIWLLML TLPLEAGRGA GRRPAMAATY WHILRRPGFF WPAVVGGLGF ATTVTLQEVS PFIMQQGFGL NVTAFGALGL VIGVAYFTGA MTVNRTVARF GGKRLMQAGT SIVAVATAAI MVLWWSGVLV GLSGMTVFIA LYCLTIFGQA VLFPNSMAMA VSDVKQQGAY AMALCGFLQQ CLAGIAAAGA VLLEHHGLWA AAIALLGLIA WLIVKLRM
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