Gene Spro_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0262 
Symbol 
ID5606614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp292821 
End bp294017 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content57% 
IMG OID640935753 
Productmajor facilitator transporter 
Protein accessionYP_001476500 
Protein GI157368511 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0989253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0321857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAG CGGTATGTGT AAAACACAGT GGTTTCTGGA GTATTCCCGC CAGAACCATG 
ACGCTGGCTT GTCTGCTGGT GTTTATGGCG CAGATGGCGA CGACGGTGTA TTTGCCTTCA
TTACCGACGG TGATGCAGGA ACTGGCAATG ACGCGCCGCG CCACCGAGCT TTCTATATCG
ATATTCGTGA TAGGAGCCGC CTTGCCGGTG TTGTTCTGGG GGGCTGCGGC CGATCGTTTT
GGCCGTCGCC TGCCGCTGAC ATTGTCTCTG GCGTTGTTTA TCAGTTGCAG TGCTCTGCTG
GCATTTTGCA GTAACGGTAC TCAGTTATTA GTGCTGCGGG CACTGCAGGG GGTTGCCGCC
GGTGGTGCTG CAATCATCGC GCGCATTATT GTTCGTGATA ACTGGAGTGG TGACGAGCTG
GCAAGGCGCC TTTCGGTGCT GTCGATAGCC TTTATCGCCG CGTTGGGCGG TGGGCAGTTT
ATCGGTGGGC TGCTCAGTCA GTATTCGCAC TGGCAAATGG GTTTTGTGGT GATGGGGCTG
ACCGGGCTGG CGATATGGTT ACTGATGCTG ACGTTGCCAC TGGAAGCGGG CCGCGGAGCA
GGCAGGCGGC CGGCCATGGC GGCAACCTAT TGGCACATTC TGCGTCGTCC GGGGTTCTTC
TGGCCGGCAG TTGTCGGCGG ATTGGGGTTT GCTACCACCG TCACTCTGCA GGAAGTGAGT
CCGTTTATCA TGCAGCAGGG GTTTGGCCTG AACGTTACCG CCTTTGGGGC TCTGGGGCTG
GTGATCGGCG TGGCTTACTT TACTGGAGCA ATGACGGTAA ACCGGACGGT TGCGCGCTTT
GGCGGTAAGC GGCTGATGCA GGCGGGGACG AGTATCGTCG CCGTTGCCAC TGCTGCGATA
ATGGTGCTGT GGTGGAGCGG TGTACTGGTG GGGCTTTCCG GTATGACAGT CTTCATCGCT
TTGTATTGTT TGACGATTTT TGGCCAGGCG GTGTTGTTTC CCAATAGCAT GGCGATGGCG
GTCAGCGATG TTAAACAGCA GGGCGCCTAC GCCATGGCGT TATGTGGCTT TCTGCAACAG
TGTCTGGCAG GCATAGCTGC AGCCGGTGCG GTTCTACTCG AACATCATGG CCTGTGGGCG
GCTGCTATCG CGTTGCTTGG TCTGATCGCC TGGTTAATTG TTAAGCTAAG GATGTAA
 
Protein sequence
MSKAVCVKHS GFWSIPARTM TLACLLVFMA QMATTVYLPS LPTVMQELAM TRRATELSIS 
IFVIGAALPV LFWGAAADRF GRRLPLTLSL ALFISCSALL AFCSNGTQLL VLRALQGVAA
GGAAIIARII VRDNWSGDEL ARRLSVLSIA FIAALGGGQF IGGLLSQYSH WQMGFVVMGL
TGLAIWLLML TLPLEAGRGA GRRPAMAATY WHILRRPGFF WPAVVGGLGF ATTVTLQEVS
PFIMQQGFGL NVTAFGALGL VIGVAYFTGA MTVNRTVARF GGKRLMQAGT SIVAVATAAI
MVLWWSGVLV GLSGMTVFIA LYCLTIFGQA VLFPNSMAMA VSDVKQQGAY AMALCGFLQQ
CLAGIAAAGA VLLEHHGLWA AAIALLGLIA WLIVKLRM