| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0152 |
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| Symbol | |
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| ID | 5604993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 168775 |
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| End bp | 170781 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640935639 |
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| Product | putative phosphodiesterase |
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| Protein accession | YP_001476390 |
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| Protein GI | 157368401 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.651531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGGTCA GGCGTTCATT AACGATTAAA CAGATGGCAA CGGTTTCCGG CGTAGCGCTG
GTGACAATCT GCATCTTTAT CGTGATCCAG TTATTCCATT TTGTGCAGCA GCGCAGGGAT
GACTATGCCC AGCAACTGGA AAATATTGCT CATTCCGTAC GTCAGCCGCT GGCGGAGGCC
GTGCTGCGCA TGGACGTGCC GGAAACCAAG CGGGTGCTGA ATACCCTGCT GCCGGTCGGT
ATTCTGAGCC GGGCGGATAT CGTACTGCCG AACGAATTCC AGGCATTACA CGCCAATTTT
CCGCCAGAAC GCCCGGTACC GACGCTGATT GCTCGCCTGT TCGAGCTGCC AATCCAGATT
TCGGTTCCGC TCTATTCGCT GGAGCGCGTG CCGGCCAACC CGCAGCCATT GGCTTATCTG
GTGCTGCAGG CCGATTCGTT CCGCATGTAC CAGTTCATTC TCAGCATGTT GTCGACCATG
TTATCGACCT ATTTGCTGCT GGCGCTGATC CTGTCGGTCT CCATTAGCTG GTGTATGAAC
CGGCTGATGG TGCATCCGCT GCGGGCGATG GCCAAAGAGC TGGAAAATAT TTCCCAGGAA
GAGGCGCCAT ACCATCAACT GATGCTGCCG GCGTTACACC AGGACGACGA ACTGGGGTTG
TTGGTGCGCA ACTACAACCG CAATCAGCAG CGGCTGGCCA AAGCCTATGC CGAAATGAGC
CGCATGAGCA CCCATCATCC GGTCACCGAG CTGCCAAATC AGGCGCTGTT CACCGCCCTG
CTGGAGCAGC ATATTGCTTC CAGCCTGCGG CCCGAGCGTT TTAACTTGCT GGTGATCAGC
ATTGAAACCC TGCATGAGGC CTCCGGCGTG CTCAATCCGG CAATGCGAGA AGTGCTGCTG
TTGACGCTGG TGAAGAAGCT GCGTGAGTGC ATCGATGAAA ACGGCGTGCT GGCGCAGCTA
AGCAAAACCG AGTTTGCCAT TTTGGCCAAA GGCGTCGAGC GTCCGTTCCA CGCCATGCAA
CTGGCGCGTC GTATCATGGC GCAGATTAAC GCGCCGCTGA GCCTGCAGGA GATGCCGTTG
CGGCCCAGCG CCAGCATCGG TATCGCCCAT TATCTTAATC CGGGGGAAAG CGCGGAGCAG
CTACTGCGCA GTGCCACCTC GGCGATGATG TCGGCGCACC GCGAAGGCAA AAATCAGGTG
TTGTTCTTCG AACCCAGCCT GACGGAACGC ACTCAAAAGC GTTTGACGCA GGAAAGTGAA
ATTCTGCATG CCATCGAGCA GCGCCGTTTC ACCCTGTTTT TACAGCCGCA GGTCGATATG
CAGTCCAACT CGGTGATCGG CGCCGAGGCC TTGCTGCGCT GGCAGCAGTA CGACGGCAGC
TTTACCCTGC CGGCAGACGT TATTCCATTA GCCGAAGAAC TGGGCGTGAT TGTGCCGCTC
GGCAACTGGG TGCTGGAAGA GGCTTGCCTG ATCCTGGCCG ATTGGCAGGC CCGTGGCATT
ACGCTGCCGC TGGCGGTCAA TGTCTCCCCA ATCCAGATGA AGCATGAAGA TTTTATTCCA
CACCTGAAGA GCCTGCTGGC GCAGTATCAG ATTGATCCGC GCAAGCTGTT GCTGGAAATT
ACCGAAACGG TGCGTATTGA CGATCTCGAT CGTGCGTTGG CGCTGTTGCG GGAGTTACAC
GATTTGGGGC TTTCCATCGC GCTGGATGAC TTCGGCATGG GATATTCCAG CCTTAATTAC
CTCAACCGAT TGAAATGCCT GCCGATCGAT TTGATTAAAA TCGACAAGAG CTTTATTCAG
GGCCTGCCGA CGGACGACGC TATGGTGCGT ATTGTCAGTT CGATTTCCGA GGTGCTGGCG
CTGCCGGTGA TGGCCGAAGG CGTCGAAAAT GCCGAGCAGC GTGACTGGCT GTTGCAGCAG
GGTATTCATA GCGGCCAGGG CTTTTTGTTT GCACGTCCGT TACCGCGCAG TGAGTTTGAA
GCCGAGTTCT GCCGGCCTCC GGCCTGA
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| Protein sequence | MRVRRSLTIK QMATVSGVAL VTICIFIVIQ LFHFVQQRRD DYAQQLENIA HSVRQPLAEA
VLRMDVPETK RVLNTLLPVG ILSRADIVLP NEFQALHANF PPERPVPTLI ARLFELPIQI
SVPLYSLERV PANPQPLAYL VLQADSFRMY QFILSMLSTM LSTYLLLALI LSVSISWCMN
RLMVHPLRAM AKELENISQE EAPYHQLMLP ALHQDDELGL LVRNYNRNQQ RLAKAYAEMS
RMSTHHPVTE LPNQALFTAL LEQHIASSLR PERFNLLVIS IETLHEASGV LNPAMREVLL
LTLVKKLREC IDENGVLAQL SKTEFAILAK GVERPFHAMQ LARRIMAQIN APLSLQEMPL
RPSASIGIAH YLNPGESAEQ LLRSATSAMM SAHREGKNQV LFFEPSLTER TQKRLTQESE
ILHAIEQRRF TLFLQPQVDM QSNSVIGAEA LLRWQQYDGS FTLPADVIPL AEELGVIVPL
GNWVLEEACL ILADWQARGI TLPLAVNVSP IQMKHEDFIP HLKSLLAQYQ IDPRKLLLEI
TETVRIDDLD RALALLRELH DLGLSIALDD FGMGYSSLNY LNRLKCLPID LIKIDKSFIQ
GLPTDDAMVR IVSSISEVLA LPVMAEGVEN AEQRDWLLQQ GIHSGQGFLF ARPLPRSEFE
AEFCRPPA
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