| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4453 |
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| Symbol | |
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| ID | 5613425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5441444 |
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| End bp | 5442244 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935423 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001476183 |
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| Protein GI | 157377583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAA GCATTTTAAC TTATACATTA GGATTGGTAG TACTTCTGTG CAGCGGAGCT
GCGCCAGCTA AGCCGACGGT TCATTCCATA CCTGCTCAAA TCATTCCATG TGATACCTCA
GATTGCAGCA AAACATTTCA GGAGTACAAA ACATTAGCGC GTTATGGTCA CTCCGATGCC
ATGTATACCC TGGCCGAGAT CTATCGAAAC GGTTACGGCA CCGAAGTCGA TATGCGCTTA
GCCACCAAGT GGTATCGACG CTCCGCAAAA TATGACAACC CATTTGCTCA GTATAAGGCC
GCTATCATCT ATCTACAGGA GAGTGATAAT CAGGATGTTG ATAAAGCGAT GAGGTACCTG
AGAGCCGCAG ATAGAGAGGG GCTCGATGAC GCAACCCACC TGCTCGGCTT GCTCTACCTG
GAGGGGGAGT TGATAGAAAC GGATCAATTC AAGGCCAAGG AGTACCTCTC CAAAGCCTTC
GAAAATGGCC ATCAGGATAC CCTAAATATC TTAGCCGATA TCAGCCAGGT TAAGTTAGAT
CTTAACGATA AGGATATCGT CCCCAAAAAA GCGCCAGTGT CTAAACCCGC CCCCGTTGGC
GAGATGGAGG TCATTGAGGT GAGGGCACCG TCACTGGAGG AGGTGGTCAC CTATCATATC
GCCAGGCTTA GGAGGAGGAA CCCGGATGTC GGAGCAGCGA CGGGAACCAT GTTAAGGGGG
CGTACCTGTG CAGAGATGAT AGCGTGTAAC ACCGAGTCTG ACCGTGAACG AATGCGAGAG
TTTCTGATGT CGACCTGGTA G
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| Protein sequence | MKGSILTYTL GLVVLLCSGA APAKPTVHSI PAQIIPCDTS DCSKTFQEYK TLARYGHSDA
MYTLAEIYRN GYGTEVDMRL ATKWYRRSAK YDNPFAQYKA AIIYLQESDN QDVDKAMRYL
RAADREGLDD ATHLLGLLYL EGELIETDQF KAKEYLSKAF ENGHQDTLNI LADISQVKLD
LNDKDIVPKK APVSKPAPVG EMEVIEVRAP SLEEVVTYHI ARLRRRNPDV GAATGTMLRG
RTCAEMIACN TESDRERMRE FLMSTW
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