| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4451 |
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| Symbol | |
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| ID | 5613423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5438990 |
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| End bp | 5439538 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935421 |
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| Product | outer membrane protein, putative |
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| Protein accession | YP_001476181 |
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| Protein GI | 157377581 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTCA ACTCTCTGTT AACCGCTGGC ATGTTACTGG CCGCGACGAC ACCCGCTCTT
GCCGCCGAAG ACCTGGGCTT TTACCTCGGT GGCCAGGTTA ACCACACCAG TGTAGAAGAC
AATATCGGTA CCTTAGATGA GTCTGCCATA GGGCTCGGCA TCTATGGTGG CTACAACTTC
AATGACAGTT TTGGCATCGA GACGAGCATT TTTTTGACCG ATAGTCTCGT CGATGAGATG
GATTTGAGAA TAGCGGCGGT GACCATCTCC CCCGTGATTC GACATGCCTT TACCGACAGT
GTAACTGGCT ATTTGAAGGC GGGTCTGGTA GTCAACAAGA CCTACAGCAA CGATGACGGT
GTTGACGAAG ATTATCGAGG CACAGGTTGG TTGTTCGGCG CCGGTGTGGA TGTGACCCTG
ACAGAGTCTC TGGCGTTACG AGTGTCTTAT GAGATGAGTG AAACTGAGCC TGAATACAGC
GAGCTGGAGA ACTATTACGC CGATATCAGC CTGAAACAAT TTGGCGTTGG TTTGCATTAC
AGATTCTAG
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| Protein sequence | MKLNSLLTAG MLLAATTPAL AAEDLGFYLG GQVNHTSVED NIGTLDESAI GLGIYGGYNF
NDSFGIETSI FLTDSLVDEM DLRIAAVTIS PVIRHAFTDS VTGYLKAGLV VNKTYSNDDG
VDEDYRGTGW LFGAGVDVTL TESLALRVSY EMSETEPEYS ELENYYADIS LKQFGVGLHY
RF
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