| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4445 |
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| Symbol | |
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| ID | 5610933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5431147 |
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| End bp | 5431647 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935415 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001476175 |
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| Protein GI | 157377575 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACC TTGCCTTTCA GGATAGCTAC CCTGAGGAAC TGAGTCACTG TTATGGCTGT
GGAAAGAATA ACTCCCATGG TCATCAGTTG AAGAGTTACT GGGATGGTGA TGAAACACGG
GCCGTATTTA TGCCGCAAGC GTTTCATACC GCTATTCCCG GGTTTGTCTA CGGCGGACTC
ATCGCGTCGT TAATCGATTG TCATGGGACG GGGAGCGCAT CGGCTGCTGC CTATCGGGAG
CAAGGGCGAG AGGTGGGCAC ACTTCCCAGC GAACGCTTCG TTACTGCCGC TCTCAATATC
GATTATCTGG CGCCCACGCC TATGGGAGTC GAGCTTGAGC TTCGTGGAGT GATCCGTGAG
GTTAAAGCGC GAAAAGTGGT AGTAGATATT ACATTGAGTA CCATGGGGAA GGTCTGTGCC
AAGGGACATA TGGTGGCGGT AAAGATGCCG GAAACCATGA TGAGTTCAGC TGTAACTAAT
GATGAGTTCA GCTGTAACTA A
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| Protein sequence | MSNLAFQDSY PEELSHCYGC GKNNSHGHQL KSYWDGDETR AVFMPQAFHT AIPGFVYGGL
IASLIDCHGT GSASAAAYRE QGREVGTLPS ERFVTAALNI DYLAPTPMGV ELELRGVIRE
VKARKVVVDI TLSTMGKVCA KGHMVAVKMP ETMMSSAVTN DEFSCN
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