| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4436 |
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| Symbol | |
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| ID | 5609943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5422807 |
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| End bp | 5424336 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935406 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476166 |
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| Protein GI | 157377566 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0113064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTATC TTCTAGCCAG TTGTATCGCA CTATTGTTAG GTCCTATTTT CTATCGCTTT
TTCACGGCAG AAAACGGACT CCAGAAAGGC CTGGATGGAT TTATATTCGT CTCCTTAGGC
GGTTTAGTGC TGGTTCATAT TTTACCCGAA CTTCTGGAGC ATGGCGGATT CCTTGCCATC
ATCTTTGTCA TCATTGGCCT CTGGGGGCCC ACGGCCAGTG AACGACTCTT CCACCGATAC
TCTGAAGTCA CCCATAATCT GACGCTTATT CTCGGAATAG GTGGACTGCT GCTGCATACC
ATCACAGACG GCGGGGCCAT GGTATTGGCT CAGCAAGATG AGAATTCAAT TCTACTGGCC
TTAGGGGTCA TACTTCATCG ACTCCCTGTT GGTTTAGCCA TCTGGTGGTT GCTTAAGCCG
CAAGTGGGTG CACGCTGGGC CATGGTGGTT CTTGGCTGCA TGATGCTGCT GACCAGCGTT
GGATACTTTG CCGGTGAACA ACTGCTCGCT CATTTGAGTC TGGATAATAC CGTATACCTG
CAGTCCTTCG TCACAGGCTC TATTCTTCAT GTTGTACTGC ACCAACCCCA TGGTCAGAGC
CATGAAGATA AACAAGGCAG ATATGAGTAC CATGCCGGGA TCGGCAGTCT GCTCGGTATC
GGCTTACTGT TTGTATTGCT GATGATGGAC TCGGGCGGAC ACGAACACCA CCATCACAGC
CACAGCACAG AGCAACTGGG TGATTGGATG CTGACGCTTG CGCCGGTATT GCTGCTCAGC
TATACAGTTG CCGCCATCAG ATTCAATTTC GGCCTGTCTC CACACAACAC GGAACTGGGT
CAGAGGTGGT TACAGCGATT AGCGGGGCCG GAAGCCCTGA TTATTACCGC ACTCCTGCTC
GGCCCTGTTA TTGCCCTGTT TCAGCTGATC GGCCTCTCGC TTCTCGGGAC GCTACTGACG
CTGGCCAAGG TTGAACCAAC CGATCCGCAT CTCTCCTTGC CCAAATCTCC CTGGCGTTTC
GGCTTCGCCC ACCTCATTGA CCGAAGTGCG CCCTGGATAC TGTTAAGCTT GATTCTCGCC
AATTTAATTG GTCACCCGGC TGTCCCCTTG GCTAATCCGG CAATTCAGGT TGCCGTGCTA
CTCGTGCTGT TTTTGCCGAT GCGTTTTTGT AACTTAGGCG GTGCGGTACT GGCACTGTCG
TTAGCCTATA GCGGTTGGAG TATGCCGGCG GTAATGCTGG CCCTAATCGC GGCACCTATC
TTTAATCTTG CTCAGTTGAA ACTGATGAAC TGGACACTCA GAGTGCTTGT TATCACTCTG
GTACTTGGCT GCTCATTGAT AACGGCAATG ATAGCGCCTC AATGGCATGC CATGATGACC
CTGCCAGACC CGATAAACAC GGTATCGCTA GTCATCCTGG CCGCCCTGTT CGCGGCAAGC
TTATTACGCT TAGGCCCGAG AAAGTTTATG GCGAGGATCA TGCTGCTAAA GCCAAAAGCG
CATAGTCACT CCCATGAGCA CAAGCATTAG
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| Protein sequence | MLYLLASCIA LLLGPIFYRF FTAENGLQKG LDGFIFVSLG GLVLVHILPE LLEHGGFLAI
IFVIIGLWGP TASERLFHRY SEVTHNLTLI LGIGGLLLHT ITDGGAMVLA QQDENSILLA
LGVILHRLPV GLAIWWLLKP QVGARWAMVV LGCMMLLTSV GYFAGEQLLA HLSLDNTVYL
QSFVTGSILH VVLHQPHGQS HEDKQGRYEY HAGIGSLLGI GLLFVLLMMD SGGHEHHHHS
HSTEQLGDWM LTLAPVLLLS YTVAAIRFNF GLSPHNTELG QRWLQRLAGP EALIITALLL
GPVIALFQLI GLSLLGTLLT LAKVEPTDPH LSLPKSPWRF GFAHLIDRSA PWILLSLILA
NLIGHPAVPL ANPAIQVAVL LVLFLPMRFC NLGGAVLALS LAYSGWSMPA VMLALIAAPI
FNLAQLKLMN WTLRVLVITL VLGCSLITAM IAPQWHAMMT LPDPINTVSL VILAALFAAS
LLRLGPRKFM ARIMLLKPKA HSHSHEHKH
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