Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4426 |
Symbol | |
ID | 5612308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5409786 |
End bp | 5410256 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640935396 |
Product | hypothetical protein |
Protein accession | YP_001476156 |
Protein GI | 157377556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACATA CCGAAAGCCA ATGGCCTATG CACGTTTCTC TCAAGAAAGT AGAGAAACAA GTTGGACGCT GGACCTCAGT GACCTGGGAG CTGGATCAGA TATTACCGGC GACTCATCAG GCACCGGAAG GCTCCAAAGT CGTAATGCTT GAGTTATATA AAGATGAGCG CGCGAGTTAC CGTTTAAATC TGGATATGGA CAACGCCATG TTGTACATCG TCTGTGATGA GCTGGAAGAT GGAACCTGGG TTCCGGCTGC GGTCTCTGCC GATCAGAACG TCGCCGCAGG TTGTCTCGAA GGTGACACGC CAGTACTTAA TCTACCAATG CCTGAGGCCA TCGCATGTTG GATCGAAGCC TTTATTACCC GTCACGGTGA AGTTGAGATC TGCGCCCACC GTCGTAAGCA TGTAAATCGC CGCAAGAATG AAGGCCCAAG TAGCAATAAC AACTTTGGGC AGAGAAACTG A
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Protein sequence | MQHTESQWPM HVSLKKVEKQ VGRWTSVTWE LDQILPATHQ APEGSKVVML ELYKDERASY RLNLDMDNAM LYIVCDELED GTWVPAAVSA DQNVAAGCLE GDTPVLNLPM PEAIACWIEA FITRHGEVEI CAHRRKHVNR RKNEGPSSNN NFGQRN
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