Gene Ssed_4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4426 
Symbol 
ID5612308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5409786 
End bp5410256 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content50% 
IMG OID640935396 
Producthypothetical protein 
Protein accessionYP_001476156 
Protein GI157377556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACATA CCGAAAGCCA ATGGCCTATG CACGTTTCTC TCAAGAAAGT AGAGAAACAA 
GTTGGACGCT GGACCTCAGT GACCTGGGAG CTGGATCAGA TATTACCGGC GACTCATCAG
GCACCGGAAG GCTCCAAAGT CGTAATGCTT GAGTTATATA AAGATGAGCG CGCGAGTTAC
CGTTTAAATC TGGATATGGA CAACGCCATG TTGTACATCG TCTGTGATGA GCTGGAAGAT
GGAACCTGGG TTCCGGCTGC GGTCTCTGCC GATCAGAACG TCGCCGCAGG TTGTCTCGAA
GGTGACACGC CAGTACTTAA TCTACCAATG CCTGAGGCCA TCGCATGTTG GATCGAAGCC
TTTATTACCC GTCACGGTGA AGTTGAGATC TGCGCCCACC GTCGTAAGCA TGTAAATCGC
CGCAAGAATG AAGGCCCAAG TAGCAATAAC AACTTTGGGC AGAGAAACTG A
 
Protein sequence
MQHTESQWPM HVSLKKVEKQ VGRWTSVTWE LDQILPATHQ APEGSKVVML ELYKDERASY 
RLNLDMDNAM LYIVCDELED GTWVPAAVSA DQNVAAGCLE GDTPVLNLPM PEAIACWIEA
FITRHGEVEI CAHRRKHVNR RKNEGPSSNN NFGQRN