| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4423 |
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| Symbol | |
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| ID | 5612305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5406537 |
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| End bp | 5407232 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935393 |
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| Product | cytoplasmic chaperone TorD family protein |
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| Protein accession | YP_001476153 |
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| Protein GI | 157377553 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAT TAGTAAGAGA AGTATCAGAA AACGATCAGT TAAGAGCCGA CATCTATCAG
CTTTTGGCTG CACTACTGCG CAGTCAGCCA AGCGCCGAGC TATTGCAATT TCTAGCCAGT
CTTGAAGTCG ATGCAAATGA CGATAGCGAG ATGACTAAGG CTTGGTTATC ACTGAAGTTA
GCGGCGAATC AATTCTCGAG TGAGCAGCTT GAAGAGGAGT ATTTCAACAT CTTCTATGGC
GTAGGCAGTG GTGAAATCAT GCCTTACGGC AGCTGGTTTA TGACGGGGTC ATTGATGGAT
AAGCCATTAG CCCTGTTACG TCAAGACTTG CAGCAGTTAG GTTTCGAGCG TGAAGAGGAT
GTCAAAGAGC CTGAAGATCA CGTTGCTGCA CTATGTGAAG TGATGGGCAC CTTGATTTTG
GAGGCGCCGG GCTATCGTCA GCTGGCATTC TATCAGCGCC ATATCGGCAG CTGGATTGAG
CGCTTCTGCA CTAATTTAGC CAAAACACCG AGCGCCGCAT TCTATGCGAC CGTGGCACAG
CTGGCTAAGT CCTTCTTCGA GGTTGAGGCA AACGAATTTG AACAGCTTCA ACTGGACATC
CCTGTGAACT GTCCAGGTTC TGAGGCTGAA AAAGCTGAAG CCGAGAAAGC CGAAGCGGAA
AAAATTGAAC CTACTACCAG TGAGCTGGCT TCTTAA
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| Protein sequence | MTELVREVSE NDQLRADIYQ LLAALLRSQP SAELLQFLAS LEVDANDDSE MTKAWLSLKL
AANQFSSEQL EEEYFNIFYG VGSGEIMPYG SWFMTGSLMD KPLALLRQDL QQLGFEREED
VKEPEDHVAA LCEVMGTLIL EAPGYRQLAF YQRHIGSWIE RFCTNLAKTP SAAFYATVAQ
LAKSFFEVEA NEFEQLQLDI PVNCPGSEAE KAEAEKAEAE KIEPTTSELA S
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