| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4417 |
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| Symbol | |
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| ID | 5613026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5397888 |
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| End bp | 5400743 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935387 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_001476147 |
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| Protein GI | 157377547 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAA CTCGCAAATC AAACGAGGCA CCTAAAGTCG AGAAAAAGAC TCTAGGCATT
AGCCGTCGTC AGTTTATGAA GCATGCAGGT ATCACTACCG GTGGTATTGC AGCGGCTTCA
CTTTTGGGTA CTGGCATGAT GCGTCGTGCT GAAGCCAAAG ATATCCCTCA CAATGCTCCA
ATCGAGATCA AGCGTACCGT TTGTAGTGCT TGTGCGGTAG GTTGTGGTCT TTATGCCGAA
GTACAAAATG GTGTTTGGAC AGGTCAAGAG CCAGCATTCG ATCACCCGTT CAACAGCGGT
GGACACTGTG CGAAAGGTGC TGCACTGCGT GAACATGGTC ACGGTGAGAA GCGTCTTAAG
TACCCAATGA AGCTTGTCGA TGGCAAGTGG AAGAAATTAT CTTGGGAGCA GGCTTTCAAC
GAAGTTGGCG ACCAGATGCT GGATATCCGT AAGGAATCTG GTCCTGATTC ACTTTACTTT
ATGGGTAGCG CGAAGTTTTC GAACGAAGGT TGTTACATGT ACCGCAAATT TGCGGCTATG
TGGGGCACGA ACAACGTCGA TCACTCAGCA CGTATCTGTC ACTCTACCAC GGTAGCCGGT
GTTGCTAACA CTTGGGGCTA CGGTGCGCAA ACCAACTCTT TCAACGATAT TCAGAATGCT
AATGCAATTT TCTTCATCGG GGCAAACCCG GCCGAAGCGC ATCCTGTTGC AATGCAGCAT
ATCTTGCTGG CGAAAGAGAA GAACAACGCT AAAGTTATCG TTGTCGACCC TCGTTTCTCA
CGTACAGCCG CTCACTCTGA TCTGCACTGT GCATTACGCC CAGGTACTGA TATCCCATTC
ATCTACGGTA TGCTTTGGCA CATCTTTGAG AACGGCTGGG AAGATAAGAC ATTTATCCAA
GAGCGTGTGT TCGAGATGGA AACTATTCGC GAAGAGGCGA AGAAGTTCCC ACCAAAAGAA
GTTGAGCATA TTACCGGTGT AAGTGAAGAG CAAGTTTACC AAGCTGCTAA ACTTATGGCC
GACAATCGTC CAGGCACCGT AGTTTGGTGT ATGGGTGGTA CTCAGCATCA CGTAGGTAAT
GCCAACACTC GTGCTTACTG TATCCTTCAG CTTGCGCTGG GTAACATGGG CGTTAAAGGT
GGTGGTACTA ACATCTTCCG TGGTCACGAT AACGTACAGG GTGCAACTGA CTTAGGTCTG
CTGTTCGATA CGCTACCTGG CTATTACGGT CTTAAGACGG GTTCTTGGAA GCATTGGTCT
CATGTATGGG ATCTGGAATT TGATTGGGTT AAGAACCGTT TCGATCAAAA TTCATACCTT
GGCCGTATTC CAATGAATAC TCCGGGTATT CCTTGTTCTC GCTGGCATGA CGGTGTGTTA
GAAACGCCTG AGAAGCTAGC TCAAAAAGAT CGTATTCGCA TGGCGTTCTT CTGGGGACAA
TCGGTTAACA CCGAAACCCG TCAACGTGAA GTACGTGACG CACTGGACAA GATGGATACT
GTCGTGGTTG TGGATCCGTT CCCAACTATG GCGGGTGTTA TGCATCGTCG TCAAAATGGT
GTTTATCTAC TTCCTGCGGC AACTCAGTTC GAAACTGAAG GTTCAGTATC TAACTCGGGT
CGTAGCCAAC AGTGGCGTGA GAAGGTTATC GAGCCATTGT TCGAGTCTAA GACCGACCTT
GAGATCATGT ACCGTCTGTC TCAGAAGCTT GGCTTTGCTC AAGAGTTTAC TAAGCGTATC
GCTAAAGATG CCAACGACCT TATGGTTATC GAAGACATTA CTCGCGAGAT TAACCGCGGT
ATGTGGACTA TCGGTATGTC TGGTCAAAGC CCAGAGCGCT TGAAGCTGCA CACCCAGAAC
TGGGGTACGT TCAGCAACAA GACCCTTGAA GCGGAAGGTG GTCCTGCAAA GGGCGATACT
TACGGTCTAC CTTGGCCTTG TTGGGGTACT CCGGAGCAGA AGCACCCAGG TACCCAGATC
CTGTATAACA CACACAAGCA TGTGCTTGAG GGTGGCGGTA ACTTCCGTGC TCGTTATGGT
GTGGAATATA AGGGTAAGAA CCTGCTTGCC GAAGGCAGCT TCTCTAAAGG CAGCGAAATC
CAAGATGGTT ACCCGGAATT CACCTCTGAG ATGCTTAAGC AACTTGGCTG GTGGGATGAC
CTTACTGCGA CCGAGAAAGC CGAAGCCGAT GGCAAGAACT GGAAGACCGA TCTTTCCGGT
GGTATCCAAC GTGTCGCTAT GAAGCACGGT TGTATTCCTT ATGGTAACGC TAAGGCGCGT
TGTATCGTTT GGACCTTCCC GGACCAGGTA CCTGTTCACC GTGAGCCGCT TTATACGCCA
CGTCGTGATC TTGTATCTAA GTACCCAACT TATGATGATA TGCAAGTTCA TCGTCTGCCG
ACTCTGTACA AGTCAATCCA AGAGAAAGAC ATGACAGGTC AGTACCCGCT GGCATTGACC
TCTGGTCGTC TGGTTGAGTA TGAAGGTGGT GGTGAAGAGT CTCGTTGTAA CCCATGGCTT
GCAGAGCTTC AGCAAGAGAT GTTTGTTGAG ATAAGCCCTG CTGATGCTGC CGATCGCGGG
ATCCGCGATG GTGATACCGT GTGGTTGGAA GGTGCCGAAG GTGGCCGAAT CAAGATTAAG
GCTATGGTAA CACCACGTGT TAAGCCTGGT GTAACTTGGA TGCCATATCA CTTCGCTGGT
GAGATGCACG GTGAAAGCCT TGCGCCAAAC TACCCGGAAG GTACGGTTCC TTATGTTATT
GGTGAGTCAG CGAACACTGC ATTGACTTAT GGTTATGACC CTGTGACTCA GATGCAGGAA
ACCAAGTCGT CGCTTTGTCA GATTGAAAAA GCGTAA
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| Protein sequence | MQLTRKSNEA PKVEKKTLGI SRRQFMKHAG ITTGGIAAAS LLGTGMMRRA EAKDIPHNAP
IEIKRTVCSA CAVGCGLYAE VQNGVWTGQE PAFDHPFNSG GHCAKGAALR EHGHGEKRLK
YPMKLVDGKW KKLSWEQAFN EVGDQMLDIR KESGPDSLYF MGSAKFSNEG CYMYRKFAAM
WGTNNVDHSA RICHSTTVAG VANTWGYGAQ TNSFNDIQNA NAIFFIGANP AEAHPVAMQH
ILLAKEKNNA KVIVVDPRFS RTAAHSDLHC ALRPGTDIPF IYGMLWHIFE NGWEDKTFIQ
ERVFEMETIR EEAKKFPPKE VEHITGVSEE QVYQAAKLMA DNRPGTVVWC MGGTQHHVGN
ANTRAYCILQ LALGNMGVKG GGTNIFRGHD NVQGATDLGL LFDTLPGYYG LKTGSWKHWS
HVWDLEFDWV KNRFDQNSYL GRIPMNTPGI PCSRWHDGVL ETPEKLAQKD RIRMAFFWGQ
SVNTETRQRE VRDALDKMDT VVVVDPFPTM AGVMHRRQNG VYLLPAATQF ETEGSVSNSG
RSQQWREKVI EPLFESKTDL EIMYRLSQKL GFAQEFTKRI AKDANDLMVI EDITREINRG
MWTIGMSGQS PERLKLHTQN WGTFSNKTLE AEGGPAKGDT YGLPWPCWGT PEQKHPGTQI
LYNTHKHVLE GGGNFRARYG VEYKGKNLLA EGSFSKGSEI QDGYPEFTSE MLKQLGWWDD
LTATEKAEAD GKNWKTDLSG GIQRVAMKHG CIPYGNAKAR CIVWTFPDQV PVHREPLYTP
RRDLVSKYPT YDDMQVHRLP TLYKSIQEKD MTGQYPLALT SGRLVEYEGG GEESRCNPWL
AELQQEMFVE ISPADAADRG IRDGDTVWLE GAEGGRIKIK AMVTPRVKPG VTWMPYHFAG
EMHGESLAPN YPEGTVPYVI GESANTALTY GYDPVTQMQE TKSSLCQIEK A
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