| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4412 |
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| Symbol | |
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| ID | 5610586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5392180 |
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| End bp | 5393019 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935382 |
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| Product | site-specific DNA-methyltransferase (adenine-specific) |
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| Protein accession | YP_001476142 |
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| Protein GI | 157377542 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.209851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATA TCCTTCTGGT TGCTAACTTG AATTGTGATC GAATCTTAGA GCTCGATAAG
CCTCTGCAGA CGGGCGGGCG ATTTCACTAT CAAGATGGAG GACAAAGGTT GGGTGGCGGT
GGAGCTAATA CCGGACTGGG CTTGGTGTGG GCACAACATA GAGTTGCATT AGTAAGCCAG
GTCGGTCGCG ATAAGATTGG TGATTGGTTA CTTGCCGAAG CAAGTACTCA GGGGATCGAT
TGTCACCTTA TTCAGCGCCA TGAAGAGAGC AGCTGTGAGA TGTTATTGGT GATGACTCCC
GATGGTGAGC GAACCATTAT TCGTCCACAA AGGCCTATCT TTGAGCTGCC GGCCCCTCCC
GTTTGGGATC AATGGGATGC CGTATACTTT AATTCGTCGG CAGAAGGTTC GGTGAGCTGG
GCTAAAACGG CGTTGAATCA TTGTTTAGTT CTGGCACAAC TTGCTAAGGA TGAGCGTCTC
AGACCCTGCC ATATTTTGAT CGCTTCTAAG ACCGACATGC TGGGACGAAG TGAACTTTCT
AATTGGGAGT ATGGAAAGAG TATTGCCGGT GAGTCGCTAA AATATTTTAT AGTGACCGAT
GGAGCCGATG GTGCGTATTT ATATACTCAG GATGGATGCC AAACTGTCCC GGCGGTGACA
TCTGACGTGG TCGATACAAC CGGGGCGGGA GATGCCTACG CTTCCGGACT TATCCATGGG
TTAGCGACAG GTCTAACAAT TATCGATTCG ATGAATGAGG GGGCGACCTG GGCCGCATTT
GCCGTTGCAA CGGCTAGTTC CATTCCCGGG GCCGCACTGA AACAGTACCT GAATGGGTAG
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| Protein sequence | MANILLVANL NCDRILELDK PLQTGGRFHY QDGGQRLGGG GANTGLGLVW AQHRVALVSQ
VGRDKIGDWL LAEASTQGID CHLIQRHEES SCEMLLVMTP DGERTIIRPQ RPIFELPAPP
VWDQWDAVYF NSSAEGSVSW AKTALNHCLV LAQLAKDERL RPCHILIASK TDMLGRSELS
NWEYGKSIAG ESLKYFIVTD GADGAYLYTQ DGCQTVPAVT SDVVDTTGAG DAYASGLIHG
LATGLTIIDS MNEGATWAAF AVATASSIPG AALKQYLNG
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