Gene Ssed_4344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4344 
Symbol 
ID5611723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5322318 
End bp5322764 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content51% 
IMG OID640935314 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001476074 
Protein GI157377474 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.333923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.255888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG CGATACAGAT ACGCCTTGCC GATAAGAGTG ACCTTCAAGG TGTGAATGTG 
CTCGAACAGG CTTGTTTCCC CGGCCACAGT TACCCGGACT TTTTCTTTCG TCAGGCATTG
GATTGTTGGC CCGAGGGCTT CCTGTTGGCC TGCGATGATG GGACTCCACT GGGGTATCTA
CTCGCCTCTG CGGGAGCAGA GCCGCATCTT CGTTGGATCT TATCTGTCGC TGTCAGTGAA
ACGCAGCGGG GGCGTGGGAT TGGACGCAAG CTTTTGACTA AATATCTGAA CAGGCTCCCC
TCATCGGTCA CTCATGTACA CTTGACTGTA GCACCTGAAA ATAGTGCTAA GGAGTTGTAC
CTGAAACAGG GCTTCGTTCA GACGGGTTAT GAATCGGACT ATTTTGGCGA TGATGCCCCC
AGGTTGTTGC TGACTTATGT TAAGTAG
 
Protein sequence
MSNAIQIRLA DKSDLQGVNV LEQACFPGHS YPDFFFRQAL DCWPEGFLLA CDDGTPLGYL 
LASAGAEPHL RWILSVAVSE TQRGRGIGRK LLTKYLNRLP SSVTHVHLTV APENSAKELY
LKQGFVQTGY ESDYFGDDAP RLLLTYVK