Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4344 |
Symbol | |
ID | 5611723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5322318 |
End bp | 5322764 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640935314 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001476074 |
Protein GI | 157377474 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.333923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.255888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACG CGATACAGAT ACGCCTTGCC GATAAGAGTG ACCTTCAAGG TGTGAATGTG CTCGAACAGG CTTGTTTCCC CGGCCACAGT TACCCGGACT TTTTCTTTCG TCAGGCATTG GATTGTTGGC CCGAGGGCTT CCTGTTGGCC TGCGATGATG GGACTCCACT GGGGTATCTA CTCGCCTCTG CGGGAGCAGA GCCGCATCTT CGTTGGATCT TATCTGTCGC TGTCAGTGAA ACGCAGCGGG GGCGTGGGAT TGGACGCAAG CTTTTGACTA AATATCTGAA CAGGCTCCCC TCATCGGTCA CTCATGTACA CTTGACTGTA GCACCTGAAA ATAGTGCTAA GGAGTTGTAC CTGAAACAGG GCTTCGTTCA GACGGGTTAT GAATCGGACT ATTTTGGCGA TGATGCCCCC AGGTTGTTGC TGACTTATGT TAAGTAG
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Protein sequence | MSNAIQIRLA DKSDLQGVNV LEQACFPGHS YPDFFFRQAL DCWPEGFLLA CDDGTPLGYL LASAGAEPHL RWILSVAVSE TQRGRGIGRK LLTKYLNRLP SSVTHVHLTV APENSAKELY LKQGFVQTGY ESDYFGDDAP RLLLTYVK
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