| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4275 |
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| Symbol | |
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| ID | 5611966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5247073 |
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| End bp | 5247864 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935235 |
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| Product | acetylglutamate kinase |
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| Protein accession | YP_001476007 |
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| Protein GI | 157377407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0548] Acetylglutamate kinase |
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| TIGRFAM ID | [TIGR00761] acetylglutamate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000930353 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.309255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTATGT CAGTAAATAA AAGCACGTTA GTACTAAAGG TTGGTGGTGC CCTGATGCAA
TGTGAAATGG GCATGGCCAG ATTGATGGAA ACGGCGGCTA AGATGATCGC CAGCGGCCAG
CAGCTGATTA TGGTTCATGG CGGAGGTTGT TTAGTCGAAG AGCAGTTAAC CGCAAATGGT
ATGACGACAG AGAAACTGGA TGGGTTGAGA GTGACGCCAC AAGAGCAGGT ACCTGTTATT
GTCGGAGCAT TAGCCGGAAC CTCTAATAAA ATTCTCCAAG GGGCTGCGAT AAAAGCGGGT
GTGACCTGTG TTGGCATGAG CTTAGGTGAT GGCGATATGG TTTCAGCTAA AGTTAAAGAT
CCGCGTTTAG GCTTTGTCGG TGAGGTCAGC CCGAAAAGTG CAACATACCT GGAGTTCATT
TTATCTCAAG GATGGATGCC GATAGTCAGT TCTATTGCCA TCGATGCAGC GGGTCAGTTA
TTAAATGTTA ACGCCGATCA AGCGGCAACA GTGTTAGCCA AACTTGTCGA TGGAAAATTG
GTTTTACTCT CTGATGTTTC AGGTGTTTTA GATGGTAAAG GACAGCTAAT CAAGAGCTTA
AACCGTTCTC AAGTCGAAGA GTTGACAAAT ATCGGTGTTA TCGAGAAAGG GATGAAGGTT
AAAGTGGAGG CGGCATTGGA AGTGGCTGAA TCGATGGGAC AGCCGGTACA GGTTGCTTCA
TGGCGTCATG CCGAACAATT GATTGCGTTA TCAAATGGCG AAGCGGTAGG GACACAGATC
CAGCCTGATT AA
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| Protein sequence | MTMSVNKSTL VLKVGGALMQ CEMGMARLME TAAKMIASGQ QLIMVHGGGC LVEEQLTANG
MTTEKLDGLR VTPQEQVPVI VGALAGTSNK ILQGAAIKAG VTCVGMSLGD GDMVSAKVKD
PRLGFVGEVS PKSATYLEFI LSQGWMPIVS SIAIDAAGQL LNVNADQAAT VLAKLVDGKL
VLLSDVSGVL DGKGQLIKSL NRSQVEELTN IGVIEKGMKV KVEAALEVAE SMGQPVQVAS
WRHAEQLIAL SNGEAVGTQI QPD
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