| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4273 |
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| Symbol | |
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| ID | 5611913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5244766 |
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| End bp | 5245989 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935233 |
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| Product | argininosuccinate synthase |
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| Protein accession | YP_001476005 |
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| Protein GI | 157377405 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0137] Argininosuccinate synthase |
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| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.898095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.346198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACG AAACGAAAAA AACAGGTGTT AAAAAGGTTG TTCTGGCTTA TTCAGGCGGT
CTTGATACCT CGGCGATTAT TCCTTGGTTG AAAGAGACCT ATGATAATTG TGAAATCATC
GCTTTCTGTG CCGATGTGGG CCAAGGTGAT GCGGAGCTGG AGGGATTGCA TGAGAAAGCC
ATCTCTTCCG GTGCATCTGA GTGCTACATC GTCGATCTGA AAGAAGAGCT GGTGGCAGAT
TATATCTACC CGACTATCGC TACCGGTGCG ATCTATGAAG GGACCTATTT ATTAGGTACA
TCGATGGCCA GACCTATTAT CGCTAAGGCG CAGGTTGAAG TTGCACGTAA AGTCGGGGCC
GATGCCGTCT GCCATGGCTG TACCGGCAAA GGAAACGATC AGGTACGTTT CGAAGGTTGT
TTTGCTGCTC TTGCACCAGA CCTCAAGGTG ATTGCTCCTT GGCGTGAGTG GGAGATGGTT
AGCCGTGAAG ATCTGCTGGA TTACCTTGCC GAGCGTAATA TCGAAACGAC TTCCTCTGTG
ACGAAGATCT ATAGCCGTGA TGCGAATGCC TGGCATATCT CCCATGAAGG TGGCGAGTTA
GAAGATCCAT GGAATGAGCC GACTAAAGGC GTGTGGACTA TGACCGTCGC GCCTGAGGAC
GCTCCCAATG AGCCTGAGTA CGTATCATTA GAGCTTGAGC AAGGCAAGAT CACTAAAGTT
AATGGTGCAT CACTTTCTCC TTACGGGGCT CTTACGGTGT TAAATGAGAT CGCCGGTGCT
CATGGGGTTG GCAGAATCGA TATTACCGAG AATAGACTCG TGGGAATGAA GTCTCGTGGC
TGTTACGAAA CTCCGGGTGG CACAGTTATG TTTGCCGCAC TAAGAGCCAT AGAAGAGTTA
GTGTTAGATA AGAGTAGTCG TGAATGGCGT GAGCAGATTG GTGCTCAGAT GGCTCACCTT
GTTTATGATG GCCGTTGGTT TACGCCATTA TGTGAGTCCC TACTGGCTGC ATCAATACCT
CTGGCTAATT TGGTCAGTGG TGAAGTCGTT ATTAAACTCT ATAAGGGGCA AGCTCACGCA
GTAAAGAAGC GTTCAGAAAA CAGCCTCTAC TCAGAAGAGT TCGCGACGTT TGGTGAGGAC
GATGTCTATA ACCAGAAAGA TGCCGAAGGT TTCATTCGCC TTTACTCTTT AGCCAGCCGT
ATCAGGGCGT TAAAGGCTAA GTAA
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| Protein sequence | MSNETKKTGV KKVVLAYSGG LDTSAIIPWL KETYDNCEII AFCADVGQGD AELEGLHEKA
ISSGASECYI VDLKEELVAD YIYPTIATGA IYEGTYLLGT SMARPIIAKA QVEVARKVGA
DAVCHGCTGK GNDQVRFEGC FAALAPDLKV IAPWREWEMV SREDLLDYLA ERNIETTSSV
TKIYSRDANA WHISHEGGEL EDPWNEPTKG VWTMTVAPED APNEPEYVSL ELEQGKITKV
NGASLSPYGA LTVLNEIAGA HGVGRIDITE NRLVGMKSRG CYETPGGTVM FAALRAIEEL
VLDKSSREWR EQIGAQMAHL VYDGRWFTPL CESLLAASIP LANLVSGEVV IKLYKGQAHA
VKKRSENSLY SEEFATFGED DVYNQKDAEG FIRLYSLASR IRALKAK
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