| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4255 |
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| Symbol | |
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| ID | 5609644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5226202 |
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| End bp | 5227089 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935215 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475987 |
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| Protein GI | 157377387 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000121997 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGCG CTGTCATTAT TGGGATCGGA ATTTTAATCT TTGGAAATAT ATTTAGTGCG
CTTTATGACG TCTCGGTTAA GTGGTTATCG GACGATGTAA ATGCCGCGAC ATTTCTACTC
GTGCGTCAAC TCTCTGCTGT GTTGATGATA CTACCTTTCT GGCTACGGGA GAGGGCACCG
AGAAGTAATC ATATTAAGCT TCACCTCTTT AGAGCCCATG TGGGAACGTC GGGTGCATTG
CTGTTAATCA TGGGACTCAT GTCACTGCCT CTTGCCACGG TCAGCTCACT GTTTTACTCG
GCTCCATTGA TGATCATGTT GATGGGATGC CTGTTTTTAA AAGAGAAGAT GAGTGGAGCA
CAATCGGTAG CGGGCCTATT AGGCTTTGTA GGCATCTTAA TCATACTGCG ACCCAGTGAG
ATGAATATGT CCGGTATTGC CGTACTGGCG GGGGCGCTTA CATTTGCCAT CAATCAGTTG
GCACTGAAAA AGCTACCCGA TACAGAGTCC CCAATAGTGA CTCTTATGTT GTATAACCTG
TTTAGCGTGC CTATCGTCGT GGTATTTACT ATCATCCAAG GGCTATCCGG GCTGAGCTGG
GAAGTATTAG GTCTTGCTAT GGTGAGTAAT GCCTTCCTAT TGGCTTATCA GTGGTTGAGT
GTACTTGCAT ACCGTAAAGC CAAGGCTAGC GAAGTTGCCA TTGCAGAATA TACTGGGCTC
ATATTTTGCG TTTTCTTCGG TTGGTTATGG TTCGATGAAT GGTTAGACGG ATTAAGCTGG
ATCGGTGCTG GTTTTATCGT GCTGCCATCA CTCTTGTTGC CCTGGATTTT TGCGGGGGTG
AGTCAGCGAC AGGTCACATC TCGTATCGCA CAGATGCACA ATAATTAA
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| Protein sequence | MKRAVIIGIG ILIFGNIFSA LYDVSVKWLS DDVNAATFLL VRQLSAVLMI LPFWLRERAP
RSNHIKLHLF RAHVGTSGAL LLIMGLMSLP LATVSSLFYS APLMIMLMGC LFLKEKMSGA
QSVAGLLGFV GILIILRPSE MNMSGIAVLA GALTFAINQL ALKKLPDTES PIVTLMLYNL
FSVPIVVVFT IIQGLSGLSW EVLGLAMVSN AFLLAYQWLS VLAYRKAKAS EVAIAEYTGL
IFCVFFGWLW FDEWLDGLSW IGAGFIVLPS LLLPWIFAGV SQRQVTSRIA QMHNN
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