| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4229 |
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| Symbol | |
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| ID | 5611438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5193962 |
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| End bp | 5194330 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640935188 |
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| Product | membrane protein |
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| Protein accession | YP_001475961 |
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| Protein GI | 157377361 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3431] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00139344 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGCGGGTAT TAGCCGTATT GATGACCTTA GTCATTTTGT GGAGTGTCGT CGATGTGGGA
CGAGTGCTGT TTATTGAGGT TATCACCCCG CCTTACGGTC TGATGGATAT GCAGGATATT
TTAGCTATCT TTGGTTCTTT TCTGGCGGTG TTAATTGCTA TCGAAATCTT CCAAAACATT
ACCATCTATC TGAAAGAGGA GGTAATCCAT GTGCAGATAG TCATTGCGAG CGCACTGATG
GCCATCTCAA GGAAAATTAT CATCTTAGAT TTTAAAGAGG TGGGGCCGGA ATATGTATGG
GCGTCGGCTG CTGTGATTAT TGCCTTGGGT GTGACTTATT GGTTGGTATC AGGTAAACGA
GATCATTAA
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| Protein sequence | MRVLAVLMTL VILWSVVDVG RVLFIEVITP PYGLMDMQDI LAIFGSFLAV LIAIEIFQNI
TIYLKEEVIH VQIVIASALM AISRKIIILD FKEVGPEYVW ASAAVIIALG VTYWLVSGKR
DH
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