| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4213 |
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| Symbol | |
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| ID | 5611860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5176301 |
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| End bp | 5176888 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935172 |
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| Product | cytoplasmic chaperone TorD family protein |
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| Protein accession | YP_001475945 |
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| Protein GI | 157377345 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAC AATATGGTCC GATGGCAACG GCTTACTTTG CCTATAAATC GATGATTTTT
TCGCCCTCAG GGACAGAGGC GTTAACTGGC ATGATCGCAT ACCTAGAAGC GGATCGCCCG
GATAGCCCTT TGCTCGCAGA AGCAAAGAAA TTTGTCGATG ACTCATCGGA ATTGGAGTTT
GACTTCAACC GCATGTGTAT CGGTCCATAT AAGTTGCTGG TTGCTCCTTA CGAGGGCGTT
TATCGCAGCG GCAATCATGT CATGAATACA GACGAAACCG TCAGAGTCGC CGAGTTTTAT
CAAGAGATTG GCTTGGTCAT TGATGAACAA TTCAATGAGC CGGCCGACTT TATCGGTAAC
GAACTGGAGT TTCTCTACTG TGTTCACGCG TTAGCGAGTG AGCAGAAAGC GGCGAATAAT
ATCGAGGCCT TCGAGGAACT CACGGCAATT GCCGACGAGT TTCTCACTAA GCACCTTGGA
ACTTGGATCA CTCCCTTCTG TGAAGGGATA AAAACCCATG CCCAACAAGC TTTTTGGCGC
GAATTTGCCA CCGAACTGCA CCTTTTTATC ACACAGCAAA TGCAGTGA
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| Protein sequence | MTAQYGPMAT AYFAYKSMIF SPSGTEALTG MIAYLEADRP DSPLLAEAKK FVDDSSELEF
DFNRMCIGPY KLLVAPYEGV YRSGNHVMNT DETVRVAEFY QEIGLVIDEQ FNEPADFIGN
ELEFLYCVHA LASEQKAANN IEAFEELTAI ADEFLTKHLG TWITPFCEGI KTHAQQAFWR
EFATELHLFI TQQMQ
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